ENSDARG00000045822


Danio rerio

Features
Gene ID: ENSDARG00000045822
  
Biological name :tnnt2e
  
Synonyms : tnnt2e / troponin T2e, cardiac
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 7508316
Gene end: 7544687
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132879
Ensembl peptide - ENSDARP00000140166
Ensembl peptide - ENSDARP00000139830
Ensembl peptide - ENSDARP00000136601
Ensembl peptide - ENSDARP00000135398
Ensembl peptide - ENSDARP00000133936
Ensembl peptide - ENSDARP00000133231
Ensembl peptide - ENSDARP00000067349
Ensembl peptide - ENSDARP00000130010
NCBI entrez gene - 556703     See in Manteia.
RefSeq - NM_001201541
RefSeq - NM_001201542
RefSeq Peptide - NP_001188470
RefSeq Peptide - NP_001188471
swissprot - A0A0R4IH19
swissprot - A0A0R4I9L4
swissprot - F1R0L0
swissprot - Q5RIF3
swissprot - Q5RIF5
swissprot - A8WGB3
swissprot - A0A0R4IYQ0
swissprot - A0A0R4INJ9
swissprot - A0A0R4IJP0
ZFIN ID - ZDB-GENE-041210-27
Ensembl - ENSDARG00000045822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnnt2d / troponin T2d, cardiacENSDARG0000000298870
tnnt3b / troponin T type 3b (skeletal, fast) / TNNT3* / P45378* / troponin T3, skeletal, fast* / troponin T3, fast skeletal type*ENSDARG0000006845757
tnnt2a / troponin T type 2a (cardiac)ENSDARG0000002061053
tnnt2c / troponin T2c, cardiacENSDARG0000003224252
tnnt2b / troponin T type 2b (cardiac)ENSDARG0000010069448
tnnt1 / troponin T type 1 (skeletal, slow) / P13805* / O88346* / troponin T1, skeletal, slow* / troponin T1, slow skeletal type*ENSDARG0000003795446
tnnt3a / troponin T type 3a (skeletal, fast) / TNNT3* / P45378* / troponin T3, skeletal, fast* / troponin T3, fast skeletal type*ENSDARG0000003027046


Protein motifs (from Interpro)
Interpro ID Name
 IPR001978  Troponin
 IPR027707  Troponin T


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006937 regulation of muscle contraction IEA
 cellular_componentGO:0005861 troponin complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr