ENSDARG00000004094


Danio rerio

Features
Gene ID: ENSDARG00000004094
  
Biological name :acsbg2
  
Synonyms : acsbg2 / acyl-CoA synthetase bubblegum family member 2
  
Possible biological names infered from orthology : 1700061G19Rik / Q2XU92 / Q5FVE4 / RIKEN cDNA 1700061G19 gene
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 20140321
Gene end: 20192151
  
Corresponding Affymetrix probe sets: Dr.7862.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000013048
Ensembl peptide - ENSDARP00000107734
NCBI entrez gene - 335159     See in Manteia.
RefSeq - XM_005166789
RefSeq - NM_001126379
RefSeq Peptide - NP_001119851
swissprot - F1RCV2
swissprot - B0S7E7
ZFIN ID - ZDB-GENE-030131-7099
Ensembl - ENSDARG00000004094
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACSBG2ENSGALG00000001749Gallus gallus
 ACSBG2ENSG00000130377Homo sapiens
 1700061G19RikENSMUSG00000024209Mus musculus
 Acsbg2ENSMUSG00000024207Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acsbg1 / acyl-CoA synthetase bubblegum family member 1 / Q96GR2* / Q99PU5*ENSDARG0000006207748
acsl5 / acyl-CoA synthetase long chain family member 5 / Q8JZR0* / Q9ULC5* / Long-chain-fatty-acid--CoA ligase 5 *ENSDARG0000007593121
acsl1a / acyl-CoA synthetase long chain family member 1a / ACSL1* / P33121* / P41216* / Long-chain-fatty-acid--CoA ligase 1 * / acyl-CoA synthetase long chain family member 1*ENSDARG0000003051420
acsl1b / acyl-CoA synthetase long chain family member 1b / ACSL1* / P33121* / P41216* / Long-chain-fatty-acid--CoA ligase 1 * / acyl-CoA synthetase long chain family member 1*ENSDARG0000000385419
acsl2 / acyl-CoA synthetase long chain family member 2ENSDARG0000007839919
acsl3b / acyl-CoA synthetase long chain family member 3b / ACSL3* / O95573* / Q9CZW4* / Long-chain-fatty-acid--CoA ligase 3 * / acyl-CoA synthetase long chain family member 3*ENSDARG0000001467417
acsl4a / acyl-CoA synthetase long chain family member 4a / ACSL4* / O60488* / Q9QUJ7* / Long-chain-fatty-acid--CoA ligase 4 * / acyl-CoA synthetase long chain family member 4*ENSDARG0000000407817
acsl3a / acyl-CoA synthetase long chain family member 3a / ACSL3* / O95573* / Q9CZW4* / Long-chain-fatty-acid--CoA ligase 3 * / acyl-CoA synthetase long chain family member 3*ENSDARG0000003207917
cwc15 / acsl4b / CWC15 spliceosome-associated protein homolog (S. cerevisiae)ENSDARG0000001075217
LO018363.1 / ACSL6* / Q9UKU0* / AC026398.1* / acyl-CoA synthetase long chain family member 6*ENSDARG000000996489
LO018363.2 / ACSL6* / Q9UKU0* / Q91WC3* / AC026398.1* / Long-chain-fatty-acid--CoA ligase 6 * / acyl-CoA synthetase long chain family member 6*ENSDARG000001136578


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR020845  AMP-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr