ENSDARG00000003854


Danio rerio

Features
Gene ID: ENSDARG00000003854
  
Biological name :acsl1b
  
Synonyms : acsl1b / acyl-CoA synthetase long chain family member 1b
  
Possible biological names infered from orthology : ACSL1 / acyl-CoA synthetase long chain family member 1 / Long-chain-fatty-acid--CoA ligase 1 / P33121 / P41216
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 937194
Gene end: 970853
  
Corresponding Affymetrix probe sets: Dr.2996.1.A1_at (Zebrafish Array)   Dr.6885.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000024318
Ensembl peptide - ENSDARP00000109890
NCBI entrez gene - 445175     See in Manteia.
RefSeq - XM_005169565
swissprot - F1QDA6
ZFIN ID - ZDB-GENE-040801-88
Ensembl - ENSDARG00000003854
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACSL1ENSGALG00000010628Gallus gallus
 ACSL1ENSG00000151726Homo sapiens
 Acsl1ENSMUSG00000018796Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acsl1a / acyl-CoA synthetase long chain family member 1a / ACSL1* / P33121* / P41216* / Long-chain-fatty-acid--CoA ligase 1 * / acyl-CoA synthetase long chain family member 1*ENSDARG0000003051472
acsl5 / acyl-CoA synthetase long chain family member 5 / Q8JZR0* / Q9ULC5* / Long-chain-fatty-acid--CoA ligase 5 *ENSDARG0000007593159
acsl2 / acyl-CoA synthetase long chain family member 2ENSDARG0000007839954
cwc15 / acsl4b / CWC15 spliceosome-associated protein homolog (S. cerevisiae)ENSDARG0000001075230
LO018363.1 / ACSL6* / Q9UKU0* / AC026398.1* / acyl-CoA synthetase long chain family member 6*ENSDARG0000009964829
acsl4a / acyl-CoA synthetase long chain family member 4a / ACSL4* / O60488* / Q9QUJ7* / Long-chain-fatty-acid--CoA ligase 4 * / acyl-CoA synthetase long chain family member 4*ENSDARG0000000407829
acsl3b / acyl-CoA synthetase long chain family member 3b / ACSL3* / O95573* / Q9CZW4* / Long-chain-fatty-acid--CoA ligase 3 * / acyl-CoA synthetase long chain family member 3*ENSDARG0000001467429
acsl3a / acyl-CoA synthetase long chain family member 3a / ACSL3* / O95573* / Q9CZW4* / Long-chain-fatty-acid--CoA ligase 3 * / acyl-CoA synthetase long chain family member 3*ENSDARG0000003207929
acsbg2 / acyl-CoA synthetase bubblegum family member 2 / Q2XU92* / Q5FVE4* / 1700061G19Rik* / RIKEN cDNA 1700061G19 gene*ENSDARG0000000409422
acsbg1 / acyl-CoA synthetase bubblegum family member 1 / Q96GR2* / Q99PU5*ENSDARG0000006207721
LO018363.2 / ACSL6* / Q9UKU0* / Q91WC3* / AC026398.1* / Long-chain-fatty-acid--CoA ligase 6 * / acyl-CoA synthetase long chain family member 6*ENSDARG0000011365719


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR020845  AMP-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
Linoleic acid (LA) metabolism
alpha-linolenic acid (ALA) metabolism
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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