ENSDARG00000010752


Danio rerio

Features
Gene ID: ENSDARG00000010752
  
Biological name :cwc15
  
Synonyms : acsl4b / cwc15 / CWC15 spliceosome-associated protein homolog (S. cerevisiae)
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 23518399
Gene end: 23581355
  
Corresponding Affymetrix probe sets: Dr.7200.1.A1_at (Zebrafish Array)   Dr.7200.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000148798
Ensembl peptide - ENSDARP00000015290
NCBI entrez gene - 334561     See in Manteia.
NCBI entrez gene - 415140     See in Manteia.
RefSeq - NM_001099739
RefSeq Peptide - NP_001093209
swissprot - A5WV16
ZFIN ID - ZDB-GENE-030131-6493
ZFIN ID - ZDB-GENE-040625-10
Ensembl - ENSDARG00000010752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acsl4a / acyl-CoA synthetase long chain family member 4a / ACSL4* / O60488* / Q9QUJ7* / Long-chain-fatty-acid--CoA ligase 4 * / acyl-CoA synthetase long chain family member 4*ENSDARG0000000407870
acsl3b / acyl-CoA synthetase long chain family member 3b / ACSL3* / O95573* / Q9CZW4* / Long-chain-fatty-acid--CoA ligase 3 * / acyl-CoA synthetase long chain family member 3*ENSDARG0000001467466
acsl3a / acyl-CoA synthetase long chain family member 3a / ACSL3* / O95573* / Q9CZW4* / Long-chain-fatty-acid--CoA ligase 3 * / acyl-CoA synthetase long chain family member 3*ENSDARG0000003207962
acsl1b / acyl-CoA synthetase long chain family member 1b / ACSL1* / P33121* / P41216* / Long-chain-fatty-acid--CoA ligase 1 * / acyl-CoA synthetase long chain family member 1*ENSDARG0000000385431
acsl5 / acyl-CoA synthetase long chain family member 5 / Q8JZR0* / Q9ULC5* / Long-chain-fatty-acid--CoA ligase 5 *ENSDARG0000007593130
acsl1a / acyl-CoA synthetase long chain family member 1a / ACSL1* / P33121* / P41216* / Long-chain-fatty-acid--CoA ligase 1 * / acyl-CoA synthetase long chain family member 1*ENSDARG0000003051430
acsl2 / acyl-CoA synthetase long chain family member 2ENSDARG0000007839929
acsbg2 / acyl-CoA synthetase bubblegum family member 2 / Q2XU92* / Q5FVE4* / 1700061G19Rik* / RIKEN cDNA 1700061G19 gene*ENSDARG0000000409420
acsbg1 / acyl-CoA synthetase bubblegum family member 1 / Q96GR2* / Q99PU5*ENSDARG0000006207719
LO018363.1 / ACSL6* / Q9UKU0* / AC026398.1* / acyl-CoA synthetase long chain family member 6*ENSDARG0000009964812
LO018363.2 / ACSL6* / Q9UKU0* / Q91WC3* / AC026398.1* / Long-chain-fatty-acid--CoA ligase 6 * / acyl-CoA synthetase long chain family member 6*ENSDARG000001136579


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR006973  Pre-mRNA-splicing factor Cwf15/Cwc15
 IPR020845  AMP-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr