ENSDARG00000030514


Danio rerio

Features
Gene ID: ENSDARG00000030514
  
Biological name :acsl1a
  
Synonyms : acsl1a / acyl-CoA synthetase long chain family member 1a
  
Possible biological names infered from orthology : ACSL1 / acyl-CoA synthetase long chain family member 1 / Long-chain-fatty-acid--CoA ligase 1 / P33121 / P41216
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 17537451
Gene end: 17587552
  
Corresponding Affymetrix probe sets: Dr.20398.1.A1_at (Zebrafish Array)   Dr.20398.1.A1_a_at (Zebrafish Array)   Dr.20398.1.A1_x_at (Zebrafish Array)   Dr.20398.2.A1_at (Zebrafish Array)   Dr.20398.2.A1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000039916
Ensembl peptide - ENSDARP00000117283
Ensembl peptide - ENSDARP00000105676
NCBI entrez gene - 555308     See in Manteia.
RefSeq - XM_005168349
RefSeq - XM_005168350
swissprot - B8JK23
swissprot - B8JK22
ZFIN ID - ZDB-GENE-050809-115
Ensembl - ENSDARG00000030514
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACSL1ENSGALG00000010628Gallus gallus
 ACSL1ENSG00000151726Homo sapiens
 Acsl1ENSMUSG00000018796Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acsl1b / acyl-CoA synthetase long chain family member 1b / ACSL1* / P33121* / P41216* / Long-chain-fatty-acid--CoA ligase 1 * / acyl-CoA synthetase long chain family member 1*ENSDARG0000000385472
acsl5 / acyl-CoA synthetase long chain family member 5 / Q8JZR0* / Q9ULC5* / Long-chain-fatty-acid--CoA ligase 5 *ENSDARG0000007593161
acsl2 / acyl-CoA synthetase long chain family member 2ENSDARG0000007839955
acsl3a / acyl-CoA synthetase long chain family member 3a / ACSL3* / O95573* / Q9CZW4* / Long-chain-fatty-acid--CoA ligase 3 * / acyl-CoA synthetase long chain family member 3*ENSDARG0000003207930
LO018363.1 / ACSL6* / Q9UKU0* / AC026398.1* / acyl-CoA synthetase long chain family member 6*ENSDARG0000009964830
cwc15 / acsl4b / CWC15 spliceosome-associated protein homolog (S. cerevisiae)ENSDARG0000001075229
acsl3b / acyl-CoA synthetase long chain family member 3b / ACSL3* / O95573* / Q9CZW4* / Long-chain-fatty-acid--CoA ligase 3 * / acyl-CoA synthetase long chain family member 3*ENSDARG0000001467429
acsl4a / acyl-CoA synthetase long chain family member 4a / ACSL4* / O60488* / Q9QUJ7* / Long-chain-fatty-acid--CoA ligase 4 * / acyl-CoA synthetase long chain family member 4*ENSDARG0000000407828
acsbg2 / acyl-CoA synthetase bubblegum family member 2 / Q2XU92* / Q5FVE4* / 1700061G19Rik* / RIKEN cDNA 1700061G19 gene*ENSDARG0000000409423
acsbg1 / acyl-CoA synthetase bubblegum family member 1 / Q96GR2* / Q99PU5*ENSDARG0000006207721
LO018363.2 / ACSL6* / Q9UKU0* / Q91WC3* / AC026398.1* / Long-chain-fatty-acid--CoA ligase 6 * / acyl-CoA synthetase long chain family member 6*ENSDARG0000011365720


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR020845  AMP-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
Linoleic acid (LA) metabolism
alpha-linolenic acid (ALA) metabolism
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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