ENSDARG00000004311


Danio rerio

Features
Gene ID: ENSDARG00000004311
  
Biological name :ldlrap1a
  
Synonyms : ldlrap1a / low density lipoprotein receptor adaptor protein 1a
  
Possible biological names infered from orthology : LDLRAP1 / low density lipoprotein receptor adaptor protein 1 / Q5SW96 / Q8C142
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 29337789
Gene end: 29363779
  
Corresponding Affymetrix probe sets: Dr.16546.1.S1_at (Zebrafish Array)   NM_198980_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000009785
NCBI entrez gene - 368278     See in Manteia.
RefSeq - NM_198980
RefSeq Peptide - NP_945331
swissprot - Q1L868
ZFIN ID - ZDB-GENE-030328-13
Ensembl - ENSDARG00000004311
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LDLRAP1ENSGALG00000001051Gallus gallus
 Q5SW96ENSG00000157978Homo sapiens
 Q8C142ENSMUSG00000037295Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ldlrap1b / low density lipoprotein receptor adaptor protein 1b / Q5SW96* / LDLRAP1* / low density lipoprotein receptor adaptor protein 1*ENSDARG0000003975070
si:dkey-71h2.2ENSDARG0000004339447
Q32PV0 / gulp1a / GULP, engulfment adaptor PTB domain containing 1a / GULP1* / Q8K2A1* / Q9UBP9* / GULP, engulfment adaptor PTB domain containing 1* / PTB domain-containing engulfment adapt...ENSDARG0000000173324
numbl / numb homolog (Drosophila)-like / Q9Y6R0* / O08919* / Numb-like protein * / NUMB like, endocytic adaptor protein*ENSDARG0000010194923
gulp1b / GULP, engulfment adaptor PTB domain containing 1b / GULP1* / Q8K2A1* / Q9UBP9* / GULP, engulfment adaptor PTB domain containing 1* / PTB domain-containing engulfment adapter protein 1 *ENSDARG0000005783323
numb / numb homolog (Drosophila)ENSDARG0000002727921


Protein motifs (from Interpro)
Interpro ID Name
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis
Chylomicron clearance
LDL clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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