ENSDARG00000039750


Danio rerio

Features
Gene ID: ENSDARG00000039750
  
Biological name :ldlrap1b
  
Synonyms : ldlrap1b / low density lipoprotein receptor adaptor protein 1b
  
Possible biological names infered from orthology : LDLRAP1 / low density lipoprotein receptor adaptor protein 1 / Q5SW96 / Q8C142
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 45582391
Gene end: 45645167
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000058092
NCBI entrez gene - 791153     See in Manteia.
RefSeq - NM_001080635
RefSeq Peptide - NP_001074104
swissprot - F1R8R1
ZFIN ID - ZDB-GENE-070112-1012
Ensembl - ENSDARG00000039750
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LDLRAP1ENSGALG00000001051Gallus gallus
 Q5SW96ENSG00000157978Homo sapiens
 Q8C142ENSMUSG00000037295Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ldlrap1a / low density lipoprotein receptor adaptor protein 1a / Q8C142* / Q5SW96* / LDLRAP1* / low density lipoprotein receptor adaptor protein 1*ENSDARG0000000431166
si:dkey-71h2.2ENSDARG0000004339449
Q32PV0 / gulp1a / GULP, engulfment adaptor PTB domain containing 1a / GULP1* / Q8K2A1* / Q9UBP9* / GULP, engulfment adaptor PTB domain containing 1* / PTB domain-containing engulfment adapt...ENSDARG0000000173322
numbl / numb homolog (Drosophila)-like / Q9Y6R0* / O08919* / Numb-like protein * / NUMB like, endocytic adaptor protein*ENSDARG0000010194922
gulp1b / GULP, engulfment adaptor PTB domain containing 1b / GULP1* / Q8K2A1* / Q9UBP9* / GULP, engulfment adaptor PTB domain containing 1* / PTB domain-containing engulfment adapter protein 1 *ENSDARG0000005783321
numb / numb homolog (Drosophila)ENSDARG0000002727921


Protein motifs (from Interpro)
Interpro ID Name
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis
Chylomicron clearance
LDL clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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