ENSDARG00000007099


Danio rerio

Features
Gene ID: ENSDARG00000007099
  
Biological name :cx43.4
  
Synonyms : connexin 43.4 / cx43.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 46405587
Gene end: 46415847
  
Corresponding Affymetrix probe sets: Dr.18287.1.S1_at (Zebrafish Array)   NM_131069_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000015225
NCBI entrez gene - 30276     See in Manteia.
RefSeq - NM_131069
RefSeq Peptide - NP_571144
swissprot - B0UYC0
ZFIN ID - ZDB-GENE-990415-38
Ensembl - ENSDARG00000007099
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000011233Gallus gallus
 ENSGALG00000042929Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cx44.2 / connexin 44.2 / si:dkey-91f15.8ENSDARG0000003420771
si:dkey-91f15.1ENSDARG0000009499068
cx47.1 / connexin 47.1 / GJC2* / Q8BQU6* / Q5T442* / gap junction protein gamma 2*ENSDARG0000007389653
gja3 / gap junction protein, alpha 3 / Q64448* / Q9Y6H8*ENSDARG0000002188933
gja8a / gap junction protein alpha 8 paralog a / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000006945132
cx34.5 / connexin 34.5ENSDARG0000006941131
gja8b / gap junction protein alpha 8 paralog b / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000001507631
cx52.6 / connexin 52.6 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000003493029
cx43 / O57474 / connexin 43ENSDARG0000004179929
cx39.9 / connexin 39.9ENSDARG0000000408229
cx32.3 / connexin 32.3ENSDARG0000004178729
cx52.7 / connexin 52.7 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000005779228
gja5b / gap junction protein, alpha 5b / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000006945027
cx52.9 / connexin 52.9 / GJA9* / P57773* / gap junction protein alpha 9*ENSDARG0000008645327
cx32.2 / Q7T047 / connexin 32.2ENSDARG0000007678927
gja5a / gap junction protein, alpha 5a / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000004006527
cx40.8 / connexin 40.8 / GJA1* / P23242* / P17302* / gap junction protein alpha 1*ENSDARG0000007119227
cx36.7 / connexin 36.7ENSDARG0000001792727
gjd2b / gap junction protein delta 2b / GJD2* / O54851* / Q9UKL4* / gap junction protein delta 2*ENSDARG0000007078127
cx28.9 / connexin 28.9ENSDARG0000004179727


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle hypoplastic , abnormal
Kupffers vesicle unlumenized , abnormal
Kupffers vesicle cilium decreased length , abnormal
Kupffers vesicle cilium decreased amount , abnormal
Show

 ZFA:0000208 gall bladder gall bladder mislocalised radially , abnormal
Show

 ZFA:0000360 heart tube heart tube mislocalised radially , abnormal
Show

 ZFA:0001390 pancreatic bud pancreatic bud mislocalised radially , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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