ENSDARG00000094990


Danio rerio

Features
Gene ID: ENSDARG00000094990
  
Biological name :si:dkey-91f15.1
  
Synonyms : si:dkey-91f15.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 21053548
Gene end: 21066911
  
Corresponding Affymetrix probe sets: Dr.8207.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115862
Ensembl peptide - ENSDARP00000126282
Ensembl peptide - ENSDARP00000151092
NCBI entrez gene - 100034658     See in Manteia.
RefSeq - NM_001083108
RefSeq Peptide - NP_001076577
swissprot - I3ITL1
swissprot - Q1LYE5
ZFIN ID - ZDB-GENE-060601-4
Ensembl - ENSDARG00000094990
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000011233Gallus gallus
 ENSGALG00000042929Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cx44.2 / connexin 44.2 / si:dkey-91f15.8ENSDARG0000003420792
cx43.4 / connexin 43.4ENSDARG0000000709965
cx47.1 / connexin 47.1 / GJC2* / Q8BQU6* / Q5T442* / gap junction protein gamma 2*ENSDARG0000007389649
gja8a / gap junction protein alpha 8 paralog a / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000006945129
gja3 / gap junction protein, alpha 3 / Q64448* / Q9Y6H8*ENSDARG0000002188929
cx52.6 / connexin 52.6 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000003493028
cx34.5 / connexin 34.5ENSDARG0000006941128
gja8b / gap junction protein alpha 8 paralog b / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000001507627
cx52.7 / connexin 52.7 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000005779227
gjd2b / gap junction protein delta 2b / GJD2* / O54851* / Q9UKL4* / gap junction protein delta 2*ENSDARG0000007078126
cx39.4 / connexin 39.4 / GJA4* / P35212* / P28235* / gap junction protein alpha 4*ENSDARG0000007035726
cx52.9 / connexin 52.9 / GJA9* / P57773* / gap junction protein alpha 9*ENSDARG0000008645326
cx43 / O57474 / connexin 43ENSDARG0000004179925
cx36.7 / connexin 36.7ENSDARG0000001792725
cx32.3 / connexin 32.3ENSDARG0000004178725
cx39.9 / connexin 39.9ENSDARG0000000408225
cx28.9 / connexin 28.9ENSDARG0000004179725
cx40.8 / connexin 40.8 / GJA1* / P23242* / P17302* / gap junction protein alpha 1*ENSDARG0000007119225
gja5a / gap junction protein, alpha 5a / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000004006524
gja5b / gap junction protein, alpha 5b / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000006945024


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr