ENSDARG00000086453


Danio rerio

Features
Gene ID: ENSDARG00000086453
  
Biological name :cx52.9
  
Synonyms : connexin 52.9 / cx52.9
  
Possible biological names infered from orthology : gap junction protein alpha 9 / GJA9 / P57773
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 53435279
Gene end: 53437459
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000112133
NCBI entrez gene - 404625     See in Manteia.
RefSeq - NM_207093
RefSeq Peptide - NP_996976
swissprot - Q6NYU5
ZFIN ID - ZDB-GENE-040426-2421
Ensembl - ENSDARG00000086453
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GJA9ENSGALG00000028175Gallus gallus
 GJA9ENSG00000131233Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cx52.7 / connexin 52.7 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000005779244
cx52.6 / connexin 52.6 / GJA10* / Q9WUS4* / Q969M2* / gap junction protein alpha 10*ENSDARG0000003493044
gja3 / gap junction protein, alpha 3 / Q64448* / Q9Y6H8*ENSDARG0000002188931
gja8a / gap junction protein alpha 8 paralog a / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000006945131
gja8b / gap junction protein alpha 8 paralog b / GJA8* / P28236* / P48165* / gap junction protein alpha 8*ENSDARG0000001507630
gja5a / gap junction protein, alpha 5a / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000004006529
gja5b / gap junction protein, alpha 5b / GJA5* / P36382* / Q01231* / gap junction protein alpha 5*ENSDARG0000006945028
cx39.9 / connexin 39.9ENSDARG0000000408228
cx43 / O57474 / connexin 43ENSDARG0000004179927
cx34.5 / connexin 34.5ENSDARG0000006941125
cx32.3 / connexin 32.3ENSDARG0000004178724
cx39.4 / connexin 39.4 / GJA4* / P35212* / P28235* / gap junction protein alpha 4*ENSDARG0000007035723
cx40.8 / connexin 40.8 / GJA1* / P23242* / P17302* / gap junction protein alpha 1*ENSDARG0000007119223
cx43.4 / connexin 43.4ENSDARG0000000709922
cx28.9 / connexin 28.9ENSDARG0000004179722
cx44.2 / connexin 44.2 / si:dkey-91f15.8ENSDARG0000003420722
cx32.2 / Q7T047 / connexin 32.2ENSDARG0000007678922
cx47.1 / connexin 47.1 / GJC2* / Q8BQU6* / Q5T442* / gap junction protein gamma 2*ENSDARG0000007389622
si:dkey-91f15.1ENSDARG0000009499022
cx36.7 / connexin 36.7ENSDARG0000001792721


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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