ENSDARG00000007349


Danio rerio

Features
Gene ID: ENSDARG00000007349
  
Biological name :dmrt1
  
Synonyms : dmrt1 / doublesex and mab-3 related transcription factor 1 / Q71MM5
  
Possible biological names infered from orthology : Q9QZ59 / Q9Y5R6
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 44944778
Gene end: 44991344
  
Corresponding Affymetrix probe sets: Dr.17656.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000108943
Ensembl peptide - ENSDARP00000143922
Ensembl peptide - ENSDARP00000111713
Ensembl peptide - ENSDARP00000044360
Ensembl peptide - ENSDARP00000106011
Ensembl peptide - ENSDARP00000107644
NCBI entrez gene - 402923     See in Manteia.
RefSeq - NM_205628
RefSeq Peptide - NP_991191
swissprot - F1QIA0
swissprot - Q5YD53
swissprot - Q71MM5
swissprot - T1ECT7
swissprot - A2BFB9
swissprot - A0A286Y9T6
ZFIN ID - ZDB-GENE-050511-1
Ensembl - ENSDARG00000007349
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DMRT1ENSGALG00000010160Gallus gallus
 DMRT1ENSG00000137090Homo sapiens
 Dmrt1ENSMUSG00000024837Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dmrt2a / doublesex and mab-3 related transcription factor 2a / DMRT2* / Q8BG36* / Q9Y5R5* / doublesex and mab-3 related transcription factor 2*ENSDARG0000001507226
dmrt2b / doublesex and mab-3 related transcription factor 2b / Q5HYR2* / DMRTC1* / Q9D9R7* / Q8IXT2* / Q8CGW9* / DMRTC2* / DMRTC1B* / Dmrtc1a* / DMRT like family C2* / DMRT like family C1* ...ENSDARG0000007001324
dmrta2 / DMRT-like family A2 / A2A9A2* / Q96SC8* / Doublesex- and mab-3-related transcription factor A2 *ENSDARG0000003941224
dmrt3a / P83758 / doublesex and mab-3 related transcription factor 3a / DMRT3* / Q80WT2* / Q9NQL9* / doublesex and mab-3 related transcription factor 3*ENSDARG0000003529023


Protein motifs (from Interpro)
Interpro ID Name
 IPR001275  DM DNA-binding domain
 IPR022114  Doublesex- and mab-3-related transcription factor 1-like
 IPR026607  DMRT/protein doublesex/protein male abnormal 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007548 sex differentiation IEA
 biological_processGO:0008584 male gonad development IMP
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030238 male sex determination IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000242 male organism male organism increased amount , abnormal
Show

 ZFA:0000303 female organism female organism increased amount , abnormal
female organism absent , abnormal
Show

 ZFA:0000403 ovary ovary increased amount , abnormal
Show

 ZFA:0000413 gonad gonad absent , abnormal
gonad mislocalised , abnormal
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 ZFA:0000598 testis testis hypoplastic , abnormal
testis disorganized , abnormal
testis germ line cell decreased amount , abnormal
testis absent , abnormal
testis increased amount , abnormal
testis decreased size , abnormal
testis unlumenized , abnormal
Show

 ZFA:0005272 immature gonad immature gonad apoptotic process decreased process quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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