ENSDARG00000035290


Danio rerio

Features
Gene ID: ENSDARG00000035290
  
Biological name :dmrt3a
  
Synonyms : dmrt3a / doublesex and mab-3 related transcription factor 3a / P83758
  
Possible biological names infered from orthology : DMRT3 / doublesex and mab-3 related transcription factor 3 / Q80WT2 / Q9NQL9
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 45000597
Gene end: 45003863
  
Corresponding Affymetrix probe sets: Dr.24033.1.S1_at (Zebrafish Array)   NM_001005779_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000051145
NCBI entrez gene - 450035     See in Manteia.
RefSeq - NM_001005779
RefSeq Peptide - NP_001005779
swissprot - P83758
ZFIN ID - ZDB-GENE-021220-3
Ensembl - ENSDARG00000035290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DMRT3ENSGALG00000010161Gallus gallus
 DMRT3ENSG00000064218Homo sapiens
 Dmrt3ENSMUSG00000042372Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dmrta2 / DMRT-like family A2 / A2A9A2* / Q96SC8* / Doublesex- and mab-3-related transcription factor A2 *ENSDARG0000003941229
dmrt2a / doublesex and mab-3 related transcription factor 2a / DMRT2* / Q8BG36* / Q9Y5R5* / doublesex and mab-3 related transcription factor 2*ENSDARG0000001507218
dmrt2b / doublesex and mab-3 related transcription factor 2b / Q5HYR2* / DMRTC1* / Q9D9R7* / Q8IXT2* / Q8CGW9* / DMRTC2* / DMRTC1B* / Dmrtc1a* / DMRT like family C2* / DMRT like family C1* ...ENSDARG0000007001316
dmrt1 / Q71MM5 / doublesex and mab-3 related transcription factor 1 / Q9QZ59* / Q9Y5R6*ENSDARG0000000734914


Protein motifs (from Interpro)
Interpro ID Name
 IPR001275  DM DNA-binding domain
 IPR005173  DMRTA motif
 IPR009060  UBA-like superfamily
 IPR026607  DMRT/protein doublesex/protein male abnormal 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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