ENSDARG00000039412


Danio rerio

Features
Gene ID: ENSDARG00000039412
  
Biological name :dmrta2
  
Synonyms : dmrta2 / DMRT-like family A2
  
Possible biological names infered from orthology : A2A9A2 / Doublesex- and mab-3-related transcription factor A2 / Q96SC8
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 16257220
Gene end: 16259063
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000057589
NCBI entrez gene - 474350     See in Manteia.
RefSeq - NM_001007064
RefSeq Peptide - NP_001007065
swissprot - B8JLF1
ZFIN ID - ZDB-GENE-041116-2
Ensembl - ENSDARG00000039412
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DMRTA2ENSGALG00000031423Gallus gallus
 DMRTA2ENSG00000142700Homo sapiens
 A2A9A2ENSMUSG00000047143Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dmrt3a / P83758 / doublesex and mab-3 related transcription factor 3a / DMRT3* / Q80WT2* / Q9NQL9* / doublesex and mab-3 related transcription factor 3*ENSDARG0000003529029
dmrt2a / doublesex and mab-3 related transcription factor 2a / DMRT2* / Q8BG36* / Q9Y5R5* / doublesex and mab-3 related transcription factor 2*ENSDARG0000001507221
dmrt2b / doublesex and mab-3 related transcription factor 2b / Q5HYR2* / DMRTC1* / Q9D9R7* / Q8IXT2* / Q8CGW9* / DMRTC2* / DMRTC1B* / Dmrtc1a* / DMRT like family C2* / DMRT like family C1* ...ENSDARG0000007001319
dmrt1 / Q71MM5 / doublesex and mab-3 related transcription factor 1 / Q9QZ59* / Q9Y5R6*ENSDARG0000000734915


Protein motifs (from Interpro)
Interpro ID Name
 IPR001275  DM DNA-binding domain
 IPR005173  DMRTA motif
 IPR009060  UBA-like superfamily
 IPR026607  DMRT/protein doublesex/protein male abnormal 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000079 telencephalon telencephalon cellular quality , abnormal
telencephalon postero-dorsal region cellular quality , abnormal
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 ZFA:0001282 adenohypophysis adenohypophysis has fewer parts of type prolactin secreting cell , abnormal
adenohypophysis corticotropin hormone secreting cell differentiation decreased occurrence , abnormal
adenohypophysis has fewer parts of type adrenocorticotropic hormone secreting cell , abnormal
adenohypophysis has extra parts of type follicle stimulating hormone secreting cell , abnormal
adenohypophysis apoptotic process increased occurrence , abnormal
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 ZFA:0005580 rostral pars anterior rostral pars anterior prolactin secreting cell dispersed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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