ENSDARG00000007560


Danio rerio

Features
Gene ID: ENSDARG00000007560
  
Biological name :sema3bl
  
Synonyms : sema3bl / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl
  
Possible biological names infered from orthology : Q4LFA9 / Q9NS98 / SEMA3G / semaphorin 3G
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 26522013
Gene end: 26573963
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119482
Ensembl peptide - ENSDARP00000046862
NCBI entrez gene - 100004611     See in Manteia.
RefSeq - NM_001122712
RefSeq Peptide - NP_001116184
swissprot - M9MMB6
swissprot - M9MM97
ZFIN ID - ZDB-GENE-030131-2956
Ensembl - ENSDARG00000007560
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEMA3GENSGALG00000004476Gallus gallus
 Q9NS98ENSG00000010319Homo sapiens
 Q4LFA9ENSMUSG00000021904Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sema3e / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E / O15041* / P70275* / semaphorin 3E*ENSDARG0000003657149
sema3ab / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab / SEMA3A* / O08665* / Q14563* / semaphorin 3A*ENSDARG0000004221049
sema3b / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B / Q13214* / semaphorin 3B*ENSDARG0000001167248
si:dkey-49n23.1ENSDARG0000004092045
sema3aa / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa / SEMA3A* / O08665* / Q14563* / semaphorin 3A*ENSDARG0000001923545
sema3d / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D / O95025* / Q8BH34* / semaphorin 3D*ENSDARG0000001736944
sema3fb / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb / SEMA3F* / O88632* / Q13275* / semaphorin 3F*ENSDARG0000005537344
sema3fa / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa / SEMA3F* / O88632* / Q13275* / semaphorin 3F*ENSDARG0000001116344
sema3c / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C / Q62181* / Q99985* / semaphorin 3C*ENSDARG0000003430041
sema3gb / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3GbENSDARG0000001360741
sema3h / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3HENSDARG0000004261640
sema3ga / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3GaENSDARG0000004254540
sema4ga / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ga / SEMA4G* / Q9NTN9* / Q9WUH7* / semaphorin 4G*ENSDARG0000007659529
sema4bb / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Bb / Q62179* / SEMA4B* / semaphorin 4B*ENSDARG0000007610428
sema4c / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C / Q64151* / Q9C0C4* / semaphorin 4C*ENSDARG0000007961128
SEMA4D / semaphorin 4D / Q92854*ENSDARG0000006780128
sema4ba / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba / Q62179* / SEMA4B* / semaphorin 4B*ENSDARG0000007441427
sema4e / semaphorin 4eENSDARG0000005299726
si:ch211-129c21.1ENSDARG0000002477526
sema4gb / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Gb / SEMA4G* / Q9NTN9* / Q9WUH7* / semaphorin 4G*ENSDARG0000008814325


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050919 negative chemotaxis IBA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0038191 neuropilin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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