ENSDARG00000067801


Danio rerio

Features
Gene ID: ENSDARG00000067801
  
Biological name :SEMA4D
  
Synonyms : SEMA4D / semaphorin 4D
  
Possible biological names infered from orthology : O09126 / Q92854
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 2780907
Gene end: 2814709
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088434
swissprot - F1QR50
Ensembl - ENSDARG00000067801
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEMA4DENSGALG00000010697Gallus gallus
 Q92854ENSG00000187764Homo sapiens
 O09126ENSMUSG00000021451Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-129c21.1ENSDARG0000002477535
sema4c / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C / Q64151* / Q9C0C4* / semaphorin 4C*ENSDARG0000007961133
sema4e / semaphorin 4eENSDARG0000005299733
sema4ba / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba / Q62179* / SEMA4B* / semaphorin 4B*ENSDARG0000007441431
sema4ga / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ga / SEMA4G* / Q9NTN9* / Q9WUH7* / semaphorin 4G*ENSDARG0000007659531
sema4bb / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Bb / Q62179* / SEMA4B* / semaphorin 4B*ENSDARG0000007610429
sema3b / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B / Q13214* / semaphorin 3B*ENSDARG0000001167227
sema3aa / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa / SEMA3A* / O08665* / Q14563* / semaphorin 3A*ENSDARG0000001923527
sema3ab / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab / SEMA3A* / O08665* / Q14563* / semaphorin 3A*ENSDARG0000004221027
sema4ab / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab / SEMA4A* / Q62178* / Q9H3S1* / semaphorin 4A*ENSDARG0000006235227
sema4gb / sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Gb / SEMA4G* / Q9NTN9* / Q9WUH7* / semaphorin 4G*ENSDARG0000008814327
si:dkey-49n23.1ENSDARG0000004092027
sema3d / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D / O95025* / Q8BH34* / semaphorin 3D*ENSDARG0000001736926
SEMA4F / ssemaphorin 4F / O95754*ENSDARG0000010030826
sema3ga / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3GaENSDARG0000004254526
sema3bl / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl / Q9NS98* / Q4LFA9* / SEMA3G* / semaphorin 3G*ENSDARG0000000756025
sema3h / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3HENSDARG0000004261625
sema3e / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E / O15041* / P70275* / semaphorin 3E*ENSDARG0000003657125
sema3gb / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3GbENSDARG0000001360725
sema3fa / sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa / SEMA3F* / O88632* / Q13275* / semaphorin 3F*ENSDARG0000001116324


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR002165  Plexin repeat
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013151  Immunoglobulin
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016201  PSI domain
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050919 negative chemotaxis IBA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Sema4D mediated inhibition of cell attachment and migration
Sema4D induced cell migration and growth-cone collapse


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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