ENSDARG00000007863


Danio rerio

Features
Gene ID: ENSDARG00000007863
  
Biological name :tra2a
  
Synonyms : tra2a / transformer 2 alpha homolog
  
Possible biological names infered from orthology : Q13595 / transformer 2 alpha
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 20177208
Gene end: 20191378
  
Corresponding Affymetrix probe sets: Dr.4183.1.S1_at (Zebrafish Array)   NM_200416_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000126162
Ensembl peptide - ENSDARP00000129899
Ensembl peptide - ENSDARP00000010426
Ensembl peptide - ENSDARP00000126020
Ensembl peptide - ENSDARP00000126060
Ensembl peptide - ENSDARP00000126113
NCBI entrez gene - 393388     See in Manteia.
RefSeq - NM_200416
RefSeq - XM_005170007
RefSeq Peptide - NP_956710
swissprot - Q7T2A0
swissprot - A0A0R4IBY2
swissprot - I3IT57
swissprot - I3ITA0
ZFIN ID - ZDB-GENE-040426-1391
Ensembl - ENSDARG00000007863
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRA2AENSGALG00000010973Gallus gallus
 TRA2AENSG00000164548Homo sapiens
 Tra2aENSMUSG00000029817Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tra2b / transformer 2 beta homolog / P62995* / P62996* / Mus musculus transformer 2 beta (Tra2b), transcript variant 2, mRNA.*ENSDARG0000000216863
rbmx / Q7ZWA3 / RNA binding motif protein, X-linked / A6NDE4* / A6NEQ0* / Gm3376* / Gm4064* / Gm7324* / O35698* / O75526* / P0C7P1* / P0DJD3* / P38159* / Q15415* / Q60990* / Q8N7X1* / Q91VM...ENSDARG0000001424425
cirbpb / cold inducible RNA binding protein b / CIRBP* / P60824* / Q14011* / cold inducible RNA binding protein*ENSDARG0000001335119
cirbpa / cold inducible RNA binding protein a / CIRBP* / Q14011* / cold inducible RNA binding protein*ENSDARG0000010367217


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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