ENSGALG00000010973


Gallus gallus

Features
Gene ID: ENSGALG00000010973
  
Biological name :TRA2A
  
Synonyms : TRA2A / transformer-2 protein homolog alpha
  
Possible biological names infered from orthology : Q13595 / transformer 2 alpha / transformer 2 alpha homolog
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 31337782
Gene end: 31361560
  
Corresponding Affymetrix probe sets: GgaAffx.11701.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000063355
Ensembl peptide - ENSGALP00000017856
NCBI entrez gene - 420618     See in Manteia.
RefSeq - NM_001006360
RefSeq Peptide - NP_001006360
swissprot - F1NPM7
swissprot - A0A1L1RWZ2
Ensembl - ENSGALG00000010973
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tra2aENSDARG00000007863Danio rerio
 TRA2AENSG00000164548Homo sapiens
 Tra2aENSMUSG00000029817Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRA2B / transformer 2 beta homolog / P62995* / P62996* / Mus musculus transformer 2 beta (Tra2b), transcript variant 2, mRNA.*ENSGALG0000000653171
RBMX / RNA-binding motif protein, X chromosome / P38159* / Q9WV02* / RNA binding motif protein, X-linked*ENSGALG0000000645728
CIRBP / cold inducible RNA binding protein / P60824* / Q14011*ENSGALG0000003091819


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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