ENSG00000164548


Homo sapiens

Features
Gene ID: ENSG00000164548
  
Biological name :TRA2A
  
Synonyms : Q13595 / TRA2A / transformer 2 alpha homolog
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p15.3
Gene start: 23504780
Gene end: 23532041
  
Corresponding Affymetrix probe sets: 204658_at (Human Genome U133 Plus 2.0 Array)   213575_at (Human Genome U133 Plus 2.0 Array)   213593_s_at (Human Genome U133 Plus 2.0 Array)   227939_s_at (Human Genome U133 Plus 2.0 Array)   229574_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000376290
Ensembl peptide - ENSP00000441116
Ensembl peptide - ENSP00000480822
Ensembl peptide - ENSP00000297071
Ensembl peptide - ENSP00000413898
NCBI entrez gene - 29896     See in Manteia.
OMIM - 602718
RefSeq - XM_017012090
RefSeq - NM_001282757
RefSeq - NM_001282758
RefSeq - NM_001282759
RefSeq - NM_013293
RefSeq - XM_005249725
RefSeq - XM_011515331
RefSeq - XM_017012089
RefSeq Peptide - NP_001269686
RefSeq Peptide - NP_001269687
RefSeq Peptide - NP_001269688
RefSeq Peptide - NP_037425
swissprot - F8WEH2
swissprot - Q13595
swissprot - Q549U1
Ensembl - ENSG00000164548
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tra2aENSDARG00000007863Danio rerio
 TRA2AENSGALG00000010973Gallus gallus
 Tra2aENSMUSG00000029817Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRA2B / P62995 / transformer 2 beta homologENSG0000013652771
RBMX / P38159 / RNA binding motif protein, X-linkedENSG0000014727430
Q96E39 / RBMXL1 / RNA binding motif protein, X-linked like 1ENSG0000021351629
O75526 / RBMXL2 / RNA binding motif protein, X-linked like 2ENSG0000017074828
P0C7P1 / RBMY1D / RNA binding motif protein, Y-linked, family 1, member DENSG0000024439523
Q15415 / RBMY1J / RNA binding motif protein, Y-linked, family 1, member JENSG0000022694123
P0DJD3 / RBMY1A1 / RNA binding motif protein, Y-linked, family 1, member A1ENSG0000023441423
Q15415 / RBMY1F / RNA binding motif protein, Y-linked, family 1, member FENSG0000016980023
A6NDE4 / RBMY1B / RNA binding motif protein, Y-linked, family 1, member BENSG0000024287523
A6NEQ0 / RBMY1E / RNA binding motif protein, Y-linked, family 1, member EENSG0000024238923
Q8N7X1 / RBMXL3 / RNA binding motif protein, X-linked like 3ENSG0000017571822
CIRBP / Q14011 / cold inducible RNA binding proteinENSG0000009962221
RBM3 / P98179 / RNA binding motif protein 3ENSG0000010231718


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IDA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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