ENSG00000169800


Homo sapiens

Features
Gene ID: ENSG00000169800
  
Biological name :RBMY1F
  
Synonyms : Q15415 / RBMY1F / RNA binding motif protein, Y-linked, family 1, member F
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: Y
Strand: -1
Band: q11.223
Gene start: 22168542
Gene end: 22182982
  
Corresponding Affymetrix probe sets: 208307_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000307155
Ensembl peptide - ENSP00000406005
NCBI entrez gene - 159163     See in Manteia.
RefSeq - XM_017030033
RefSeq - NM_001303410
RefSeq - NM_152585
RefSeq - XM_017030032
RefSeq Peptide - NP_689798
RefSeq Peptide - NP_001290339
swissprot - Q15415
swissprot - J3KQ82
Ensembl - ENSG00000169800
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbmxENSDARG00000014244Danio rerio
 Gm10256ENSMUSG00000095852Mus musculus
 Gm10352ENSMUSG00000091987Mus musculus
 Gm21693ENSMUSG00000094511Mus musculus
 Gm29289ENSMUSG00000101667Mus musculus
 Gm3376ENSMUSG00000096520Mus musculus
 Gm4064ENSMUSG00000102053Mus musculus
 O35698ENSMUSG00000093918Mus musculus
 O35698ENSMUSG00000093987Mus musculus
 O35698ENSMUSG00000094658Mus musculus
 O35698ENSMUSG00000095948Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q15415 / RBMY1J / RNA binding motif protein, Y-linked, family 1, member JENSG00000226941100
P0DJD3 / RBMY1A1 / RNA binding motif protein, Y-linked, family 1, member A1ENSG0000023441499
A6NDE4 / RBMY1B / RNA binding motif protein, Y-linked, family 1, member BENSG0000024287599
A6NEQ0 / RBMY1E / RNA binding motif protein, Y-linked, family 1, member EENSG0000024238999
P0C7P1 / RBMY1D / RNA binding motif protein, Y-linked, family 1, member DENSG0000024439599
RBMX / P38159 / RNA binding motif protein, X-linkedENSG0000014727448
Q96E39 / RBMXL1 / RNA binding motif protein, X-linked like 1ENSG0000021351646
O75526 / RBMXL2 / RNA binding motif protein, X-linked like 2ENSG0000017074838
Q8N7X1 / RBMXL3 / RNA binding motif protein, X-linked like 3ENSG0000017571830
CIRBP / Q14011 / cold inducible RNA binding proteinENSG0000009962217
TRA2B / P62995 / transformer 2 beta homologENSG0000013652714
RBM3 / P98179 / RNA binding motif protein 3ENSG0000010231714
TRA2A / Q13595 / transformer 2 alpha homologENSG0000016454813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012604  RBM1CTR
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007283 spermatogenesis NAS
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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