ENSDARG00000008141


Danio rerio

Features
Gene ID: ENSDARG00000008141
  
Biological name :rbl1
  
Synonyms : rbl1 / retinoblastoma-like 1 (p107)
  
Possible biological names infered from orthology : P28749 / Q64701 / RB transcriptional corepressor like 1 / Retinoblastoma-like protein 1
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 51549203
Gene end: 51573975
  
Corresponding Affymetrix probe sets: Dr.6209.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124719
Ensembl peptide - ENSDARP00000068355
NCBI entrez gene - 795522     See in Manteia.
RefSeq - NM_001130610
RefSeq Peptide - NP_001124082
swissprot - F8W2I3
swissprot - F1QY31
ZFIN ID - ZDB-GENE-030131-8179
Ensembl - ENSDARG00000008141
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBL1ENSGALG00000001332Gallus gallus
 RBL1ENSG00000080839Homo sapiens
 Rbl1ENSMUSG00000027641Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rbl2 / retinoblastoma-like 2 (p130) / Q64700* / Q08999* / Retinoblastoma-like protein 2 * / RB transcriptional corepressor like 2*ENSDARG0000004563648
rb1 / retinoblastoma 1 / P13405* / P06400* / RB transcriptional corepressor 1* / Retinoblastoma-associated protein *ENSDARG0000000678221


Protein motifs (from Interpro)
Interpro ID Name
 IPR002719  Retinoblastoma-associated protein, B-box
 IPR002720  Retinoblastoma-associated protein, A-box
 IPR013763  Cyclin-like
 IPR015030  Retinoblastoma-associated protein, C-terminal
 IPR024599  Retinoblastoma-associated protein, N-terminal
 IPR028309  Retinoblastoma protein family
 IPR028310  Retinoblastoma-like protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0051726 regulation of cell cycle IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA


Pathways (from Reactome)
Pathway description
G0 and Early G1
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
Cyclin D associated events in G1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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