ENSDARG00000008278


Danio rerio

Features
Gene ID: ENSDARG00000008278
  
Biological name :rcor2
  
Synonyms : Q6P116 / rcor2 / REST corepressor 2
  
Possible biological names infered from orthology : Q8C796 / Q8IZ40
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 24979833
Gene end: 24995640
  
Corresponding Affymetrix probe sets: Dr.15573.1.A1_at (Zebrafish Array)   Dr.15573.2.S1_at (Zebrafish Array)   NM_205638_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000026854
Ensembl peptide - ENSDARP00000142915
Ensembl peptide - ENSDARP00000142842
Ensembl peptide - ENSDARP00000142777
NCBI entrez gene - 402934     See in Manteia.
RefSeq - NM_205638
RefSeq Peptide - NP_991201
swissprot - A0A1D5NSM5
swissprot - A0A1D5NSG2
swissprot - A0A1D5NSU7
swissprot - Q6P116
ZFIN ID - ZDB-GENE-040426-1812
Ensembl - ENSDARG00000008278
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCOR2ENSG00000167771Homo sapiens
 Rcor2ENSMUSG00000024968Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rcor3 / REST corepressor 3 / Q6PGA0* / Q9P2K3*ENSDARG0000000450254
rcor1 / REST corepressor 1 / Q8CFE3* / Q9UKL0*ENSDARG0000003143442
ncor1 / nuclear receptor corepressor 1 / O75376* / nuclear receptor co-repressor 1*ENSDARG0000003528522
ncor2 / nuclear receptor corepressor 2 / Q9WU42* / Q9Y618*ENSDARG0000000096619


Protein motifs (from Interpro)
Interpro ID Name
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017884  SANT domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IBA
 cellular_componentGO:0017053 transcriptional repressor complex IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0003714 transcription corepressor activity IBA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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