ENSDARG00000009443


Danio rerio

Features
Gene ID: ENSDARG00000009443
  
Biological name :zgc:92137
  
Synonyms : zgc:92137
  
Possible biological names infered from orthology : Alpha-amylase 1 / Amy1 / AMY1A / AMY1B / AMY1C / Amy2 / AMY2A / Amy2a1 / Amy2a2 / Amy2a3 / Amy2a4 / AMY2B / amylase 2a1 / amylase 2a2 / amylase 2a3 / amylase 2a4 / amylase, alpha 1A (salivary) / amylase, alpha 1B (salivary) / amylase, alpha 1C (salivary) / amylase, alpha 2A (pancreatic) / amylase, alpha 2B (pancreatic) / P00687 / P00688 / P04745 / P04746 / P19961 / Pancreatic alpha-amylase
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 42983983
Gene end: 42988356
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000014921
NCBI entrez gene - 445049     See in Manteia.
RefSeq - NM_001003729
RefSeq Peptide - NP_001003729
swissprot - F1QTT5
ZFIN ID - ZDB-GENE-040801-179
Ensembl - ENSDARG00000009443
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AMY1AENSGALG00000005147Gallus gallus
 AMY2AENSGALG00000038740Gallus gallus
 AMY1AENSG00000237763Homo sapiens
 AMY1BENSG00000174876Homo sapiens
 AMY1CENSG00000187733Homo sapiens
 AMY2AENSG00000243480Homo sapiens
 AMY2BENSG00000240038Homo sapiens
 Amy1ENSMUSG00000074264Mus musculus
 Amy2ENSMUSG00000074268Mus musculus
 Amy2a1ENSMUSG00000070360Mus musculus
 Amy2a2ENSMUSG00000096569Mus musculus
 Amy2a3ENSMUSG00000093931Mus musculus
 Amy2a4ENSMUSG00000096770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:66313 / Amy1* / Amy2* / AMY1B* / AMY1C* / AMY2A* / AMY2B* / AMY1A* / P04746* / P00688* / P00687* / Amy2a1* / Amy2a2* / Amy2a3* / Amy2a4* / P19961* / P04745* / amylase 2a3* / amylase 2a1...ENSDARG0000003035783
amy2a / amylase, alpha 2A (pancreatic) / Amy2* / Amy1* / AMY2B* / AMY1A* / AMY1B* / AMY1C* / Amy2a3* / Amy2a4* / P00687* / P04745* / Amy2a2* / P00688* / Amy2a1* / P19961* / P04746* / amylas...ENSDARG0000001385679


Protein motifs (from Interpro)
Interpro ID Name
 IPR006046  Alpha amylase
 IPR006047  Glycosyl hydrolase, family 13, catalytic domain
 IPR006048  Alpha-amylase/branching enzyme, C-terminal all beta
 IPR017853  Glycoside hydrolase superfamily
 IPR031319  Alpha-amylase, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004556 alpha-amylase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA
 molecular_functionGO:0043169 cation binding IEA
 molecular_functionGO:0103025 alpha-amylase activity (releasing maltohexaose) IEA


Pathways (from Reactome)
Pathway description
Digestion of dietary carbohydrate


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr