ENSDARG00000013856


Danio rerio

Features
Gene ID: ENSDARG00000013856
  
Biological name :amy2a
  
Synonyms : amy2a / amylase, alpha 2A (pancreatic)
  
Possible biological names infered from orthology : Alpha-amylase 1 / Amy1 / AMY1A / AMY1B / AMY1C / Amy2 / Amy2a1 / Amy2a2 / Amy2a3 / Amy2a4 / AMY2B / amylase 2a1 / amylase 2a2 / amylase 2a3 / amylase 2a4 / amylase, alpha 1A (salivary) / amylase, alpha 1B (salivary) / amylase, alpha 1C (salivary) / amylase, alpha 2B (pancreatic) / P00687 / P00688 / P04745 / P04746 / P19961 / Pancreatic alpha-amylase
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 15612755
Gene end: 15626972
  
Corresponding Affymetrix probe sets: Dr.2437.1.S1_at (Zebrafish Array)   NM_213011_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000021453
NCBI entrez gene - 406539     See in Manteia.
RefSeq - NM_213011
RefSeq Peptide - NP_998176
swissprot - Q6P5J0
ZFIN ID - ZDB-GENE-040426-2393
Ensembl - ENSDARG00000013856
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AMY1AENSGALG00000005147Gallus gallus
 AMY2AENSGALG00000038740Gallus gallus
 AMY1AENSG00000237763Homo sapiens
 AMY1BENSG00000174876Homo sapiens
 AMY1CENSG00000187733Homo sapiens
 AMY2AENSG00000243480Homo sapiens
 AMY2BENSG00000240038Homo sapiens
 Amy1ENSMUSG00000074264Mus musculus
 Amy2ENSMUSG00000074268Mus musculus
 Amy2a1ENSMUSG00000070360Mus musculus
 Amy2a2ENSMUSG00000096569Mus musculus
 Amy2a3ENSMUSG00000093931Mus musculus
 Amy2a4ENSMUSG00000096770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:66313 / Amy1* / Amy2* / AMY1B* / AMY1C* / AMY2A* / AMY2B* / AMY1A* / P04746* / P00688* / P00687* / Amy2a1* / Amy2a2* / Amy2a3* / Amy2a4* / P19961* / P04745* / amylase 2a3* / amylase 2a1...ENSDARG0000003035779
zgc:92137 / Amy1* / Amy2* / AMY1B* / AMY1C* / AMY2A* / AMY2B* / AMY1A* / P04746* / P00688* / P00687* / Amy2a1* / Amy2a2* / Amy2a3* / Amy2a4* / P19961* / P04745* / amylase 2a3* / amylase 2a1...ENSDARG0000000944379


Protein motifs (from Interpro)
Interpro ID Name
 IPR006046  Alpha amylase
 IPR006047  Glycosyl hydrolase, family 13, catalytic domain
 IPR006048  Alpha-amylase/branching enzyme, C-terminal all beta
 IPR017853  Glycoside hydrolase superfamily
 IPR031319  Alpha-amylase, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004556 alpha-amylase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA
 molecular_functionGO:0043169 cation binding IEA
 molecular_functionGO:0103025 alpha-amylase activity (releasing maltohexaose) IEA


Pathways (from Reactome)
Pathway description
Digestion of dietary carbohydrate


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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