ENSDARG00000009745


Danio rerio

Features
Gene ID: ENSDARG00000009745
  
Biological name :fbxw2
  
Synonyms : F-box and WD repeat domain containing 2 / fbxw2
  
Possible biological names infered from orthology : Q9UKT8
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 32380026
Gene end: 32396929
  
Corresponding Affymetrix probe sets: Dr.25115.1.A1_at (Zebrafish Array)   Dr.7935.1.S1_at (Zebrafish Array)   Dr.7935.2.S1_a_at (Zebrafish Array)   NM_001018165_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000010071
Ensembl peptide - ENSDARP00000115897
NCBI entrez gene - 553942     See in Manteia.
RefSeq - NM_001018165
RefSeq Peptide - NP_001018175
swissprot - F1Q697
swissprot - B8A562
ZFIN ID - ZDB-GENE-050522-303
Ensembl - ENSDARG00000009745
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FBXW2ENSGALG00000000864Gallus gallus
 FBXW2ENSG00000119402Homo sapiens
 Fbxw2ENSMUSG00000035949Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fbxw11b / F-box and WD repeat domain containing 11b / Q9UKB1* / FBXW11* / Q5SRY7* / F-box/WD repeat-containing protein 11 * / F-box and WD repeat domain containing 11*ENSDARG0000001723021
fbxw7 / F-box and WD repeat domain containing 7 / Q8VBV4* / Q969H0* / F-box/WD repeat-containing protein 7 *ENSDARG0000006099421
fbxw11a / F-box and WD repeat domain containing 11a / FBXW11* / Q9UKB1* / F-box and WD repeat domain containing 11*ENSDARG0000010480620
traf7 / TNF receptor-associated factor 7 / Q6Q0C0*ENSDARG0000006020717
fbxw10 / F-box and WD repeat domain containing 10 / CDRT1* / Q5XX13* / O95170* / Q5SUS0* / CMT1A duplicated region transcript 1* / F-box/WD repeat-containing protein 10 *ENSDARG0000008648416
znf106a / zinc finger protein 106a / Q9H2Y7* / Zfp106* / ZNF106* / zinc finger protein 106*ENSDARG0000001665115
znf106b / zinc finger protein 106bENSDARG0000009194711


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR001810  F-box domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr