ENSDARG00000086484


Danio rerio

Features
Gene ID: ENSDARG00000086484
  
Biological name :fbxw10
  
Synonyms : F-box and WD repeat domain containing 10 / fbxw10
  
Possible biological names infered from orthology : CDRT1 / CMT1A duplicated region transcript 1 / F-box/WD repeat-containing protein 10 / O95170 / Q5SUS0 / Q5XX13
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 36524084
Gene end: 36534476
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000112164
NCBI entrez gene - 563998     See in Manteia.
swissprot - E7FEU4
ZFIN ID - ZDB-GENE-101021-1
Ensembl - ENSDARG00000086484
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000044567Gallus gallus
 CDRT1ENSG00000241322Homo sapiens
 FBXW10ENSG00000171931Homo sapiens
 Fbxw10ENSMUSG00000090173Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fbxw11b / F-box and WD repeat domain containing 11b / Q9UKB1* / FBXW11* / Q5SRY7* / F-box/WD repeat-containing protein 11 * / F-box and WD repeat domain containing 11*ENSDARG0000001723011
znf106a / zinc finger protein 106a / Q9H2Y7* / Zfp106* / ZNF106* / zinc finger protein 106*ENSDARG0000001665111
fbxw7 / F-box and WD repeat domain containing 7 / Q8VBV4* / Q969H0* / F-box/WD repeat-containing protein 7 *ENSDARG0000006099411
fbxw11a / F-box and WD repeat domain containing 11a / FBXW11* / Q9UKB1* / F-box and WD repeat domain containing 11*ENSDARG0000010480611
fbxw2 / F-box and WD repeat domain containing 2 / Q9UKT8*ENSDARG0000000974510
traf7 / TNF receptor-associated factor 7 / Q6Q0C0*ENSDARG000000602078
znf106b / zinc finger protein 106bENSDARG000000919476


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr