ENSDARG00000010425


Danio rerio

Features
Gene ID: ENSDARG00000010425
  
Biological name :scara5
  
Synonyms : Q5RFW0 / scara5 / scavenger receptor class A, member 5 (putative)
  
Possible biological names infered from orthology : Q6ZMJ2 / Q8K299 / scavenger receptor class A member 5
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 1354695
Gene end: 1383916
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000126688
Ensembl peptide - ENSDARP00000150337
NCBI entrez gene - 564500     See in Manteia.
RefSeq - NM_001030190
RefSeq Peptide - NP_001025361
swissprot - Q5RFW0
ZFIN ID - ZDB-GENE-041210-258
Ensembl - ENSDARG00000010425
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCARA5ENSGALG00000016580Gallus gallus
 Q6ZMJ2ENSG00000168079Homo sapiens
 Q8K299ENSMUSG00000022032Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
marco / macrophage receptor with collagenous structure / Q9UEW3*ENSDARG0000005929421
loxl2b / A1L1V4 / lysyl oxidase-like 2b / LOXL2* / Q9Y4K0* / P58022* / lysyl oxidase like 2* / Lysyl oxidase homolog 2 *ENSDARG0000004407415
F1QQC3 / loxl2a / lysyl oxidase-like 2a / LOXL2* / Q9Y4K0* / lysyl oxidase like 2*ENSDARG0000004401015
F1RD85 / loxl3a / lysyl oxidase-like 3aENSDARG0000007630614
B8A4W9 / loxl3b / lysyl oxidase-like 3bENSDARG0000003956314
loxl4 / lysyl oxidase-like 4ENSDARG0000002508914
CT583642.2ENSDARG0000011131510
si:cabz01100188.1ENSDARG0000010544210
si:dkey-21h14.3ENSDARG000000960479
si:dkey-242e21.3 / CD6* / P30203* / Q61003* / CD6 molecule* / T-cell differentiation antigen CD6 *ENSDARG000000757238
si:ch211-150o23.3ENSDARG000000785028
loxl1 / lysyl oxidase-like 1 / Q08397*ENSDARG000000544514
loxl5a / lysyl oxidase-like 5aENSDARG000000716802
loxl5b / lysyl oxidase-like 5bENSDARG000000769042
loxa / lysyl oxidase aENSDARG000000032592


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR008160  Collagen triple helix repeat
 IPR017448  SRCR-like domain
 IPR034726  Scavenger receptor class A member 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006879 cellular iron ion homeostasis ISS
 biological_processGO:0006897 endocytosis ISS
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0034755 iron ion transmembrane transport ISS
 biological_processGO:0055072 iron ion homeostasis IEA
 biological_processGO:0070207 protein homotrimerization ISS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0070287 ferritin receptor activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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