ENSDARG00000012403


Danio rerio

Features
Gene ID: ENSDARG00000012403
  
Biological name :ercc6l2
  
Synonyms : ercc6l2 / excision repair cross-complementation group 6-like 2
  
Possible biological names infered from orthology : DNA excision repair protein ERCC-6-like 2 / ERCC excision repair 6 like 2 / Q5T890 / Q9JIM3
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 29898715
Gene end: 29930821
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109375
NCBI entrez gene - 553504     See in Manteia.
RefSeq - XM_009304065
RefSeq - XM_021478257
RefSeq - NM_001327769
RefSeq - XM_009304064
RefSeq Peptide - NP_001314698
swissprot - F1QJP0
ZFIN ID - ZDB-GENE-110411-274
Ensembl - ENSDARG00000012403
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5T890ENSG00000182150Homo sapiens
 Q9JIM3ENSMUSG00000021470Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ercc6 / excision repair cross-complementation group 6 / P0DP91* / Q03468* / Q8N328* / ERCC excision repair 6, chromatin remodeling factor*ENSDARG0000007561218
A2BGR3 / ercc6l / excision repair cross-complementation group 6-like / Q8BHK9* / Q2NKX8* / DNA excision repair protein ERCC-6-like * / ERCC excision repair 6 like, spindle assembly checkpoi...ENSDARG0000000247918


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029256  Helicase-associated putative binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr