ENSG00000182150


Homo sapiens

Features
Gene ID: ENSG00000182150
  
Biological name :ERCC6L2
  
Synonyms : ERCC6L2 / ERCC excision repair 6 like 2 / Q5T890
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q22.32
Gene start: 95875701
Gene end: 96014571
  
Corresponding Affymetrix probe sets: 228211_at (Human Genome U133 Plus 2.0 Array)   232013_at (Human Genome U133 Plus 2.0 Array)   232801_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000473877
Ensembl peptide - ENSP00000395345
Ensembl peptide - ENSP00000409751
Ensembl peptide - ENSP00000288985
Ensembl peptide - ENSP00000320939
Ensembl peptide - ENSP00000384215
NCBI entrez gene - 375748     See in Manteia.
OMIM - 615667
RefSeq - XM_017014707
RefSeq - NM_001010895
RefSeq - NM_020207
RefSeq - XM_011518641
RefSeq - XM_011518644
RefSeq - XM_011518645
RefSeq - XM_011518646
RefSeq - XM_011518647
RefSeq - XM_011518650
RefSeq Peptide - NP_001010895
RefSeq Peptide - NP_064592
swissprot - X6RE28
swissprot - F2Z2R4
swissprot - Q5T890
swissprot - H0Y3T7
swissprot - S4R327
swissprot - H7BXQ9
Ensembl - ENSG00000182150
  
Related genetic diseases (OMIM): 615715 - Bone marrow failure syndrome 2, 615715
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ercc6l2ENSDARG00000012403Danio rerio
 Q9JIM3ENSMUSG00000021470Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ERCC6 / P0DP91 / Q03468 / Q8N328 / ERCC excision repair 6, chromatin remodeling factorENSG0000022583029
ERCC6L / Q2NKX8 / ERCC excision repair 6 like, spindle assembly checkpoint helicaseENSG0000018687126


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR002464  DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029256  Helicase-associated putative binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0034614 cellular response to reactive oxygen species IMP
 biological_processGO:0036297 interstrand cross-link repair IMP
 cellular_componentGO:0005634 nucleus IMP
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IMP
 cellular_componentGO:0005739 mitochondrion IMP
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0032991 protein-containing complex IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019901 protein kinase binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001873 Thrombocytopenia 
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 HP:0001882 Leukopenia 
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 HP:0001903 Anemia 
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 HP:0005528 Bone marrow hypoplasia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr