ENSDARG00000014373
Danio rerio | |
Features
| Gene ID: | ENSDARG00000014373 | | | | | Biological name : | ddx4 | | | | | Synonyms : | ddx4 / DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 | | | | | Possible biological names infered from orthology : | ATP-dependent RNA helicase DDX4 / DEAD-box helicase 4 / Q61496 / Q9NQI0 | | | | | Species: | Danio rerio | | | | | Chr. number: | 10 | | Strand: | 1 | | Band: | | | Gene start: | 6884123 | | Gene end: | 6905574 | | | | | Corresponding Affymetrix probe sets: | Dr.559.2.S1_a_at (Zebrafish Array) NM_131057_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000111634
Ensembl peptide - ENSDARP00000096157
Ensembl peptide - ENSDARP00000110084
Ensembl peptide - ENSDARP00000125001
Ensembl peptide - ENSDARP00000123870
Ensembl peptide - ENSDARP00000124026
NCBI entrez gene - 30263
See in Manteia.
RefSeq - XM_005156453
RefSeq - XM_017357927
RefSeq - XM_021479102
RefSeq - XM_021479103
RefSeq - XM_021479104
RefSeq - XM_021479105
RefSeq - NM_131057
RefSeq - XM_017357926
RefSeq Peptide - NP_571132
swissprot - F8W4P0
swissprot - E7EZA2
swissprot - F1QSP5
swissprot - F1R6M3
swissprot - F8W3U8
swissprot - Q8QGG8
ZFIN ID - ZDB-GENE-990415-272
Ensembl - ENSDARG00000014373
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| ddx3a / DEAD (Asp-Glu-Ala-Asp) box helicase 3a / DDX3X* / DDX3Y* / O15523* / O00571* / P16381* / D1Pas1* / Q62167* / Q62095* / DEAD-box helicase 3, Y-linked* / DEAD-box helicase 3, X-linked... | ENSDARG00000020573 | 37 | | ddx3b / DEAD (Asp-Glu-Ala-Asp) box helicase 3b / DDX3X* / DDX3Y* / O15523* / O00571* / P16381* / D1Pas1* / Q62167* / Q62095* / DEAD-box helicase 3, Y-linked* / DEAD-box helicase 3, X-linked... | ENSDARG00000005774 | 37 | | ddx59 / DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 / Q5T1V6* / Q9DBN9* / DEAD-box helicase 59* / Probable ATP-dependent RNA helicase DDX59 * | ENSDARG00000022177 | 20 | | ddx1 / DEAD (Asp-Glu-Ala-Asp) box helicase 1 / Q91VR5* / Q92499* / DEAD-box helicase 1* / ATP-dependent RNA helicase DDX1 * | ENSDARG00000032117 | 16 |
Protein motifs (from Interpro)
| IPR000629 | ATP-dependent RNA helicase DEAD-box, conserved site | | IPR001650 | Helicase, C-terminal | | IPR011545 | DEAD/DEAH box helicase domain | | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | | IPR014014 | RNA helicase, DEAD-box type, Q motif | | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000242 | male organism | male organism sterile , abnormal |
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| | ZFA:0000303 | female organism | female organism absent , abnormal |
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| | ZFA:0000413 | gonad | gonad absent , abnormal
gonad decreased amount , abnormal
gonad spatial pattern , abnormal
gonad decreased size , abnormal
gonad primordial germ cell decreased amount , abnormal |
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| | ZFA:0000598 | testis | testis lymphocyte increased amount , abnormal
testis absent , abnormal
testis decreased size , abnormal |
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| | ZFA:0005879 | seminiferous tubule | seminiferous tubule germ line cell absent , abnormal |
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| | ZFA:0009288 | primordial germ cell | primordial germ cell absent , abnormal
primordial germ cell vacuole increased amount , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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