ENSDARG00000014587


Danio rerio

Features
Gene ID: ENSDARG00000014587
  
Biological name :slc38a5b
  
Synonyms : slc38a5b / solute carrier family 38, member 5b
  
Possible biological names infered from orthology : Q3U1J0 / Q8WUX1 / SLC38A5 / Sodium-coupled neutral amino acid transporter 5 / solute carrier family 38 member 5
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 23579974
Gene end: 23612462
  
Corresponding Affymetrix probe sets: Dr.5364.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000004787
Ensembl peptide - ENSDARP00000149956
NCBI entrez gene - 436921     See in Manteia.
swissprot - Q6DG25
ZFIN ID - ZDB-GENE-040718-395
Ensembl - ENSDARG00000014587
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8WUX1ENSG00000017483Homo sapiens
 Q3U1J0ENSMUSG00000031170Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc38a5a / solute carrier family 38, member 5a / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG0000000990170
slc38a3a / solute carrier family 38, member 3a / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG0000002706566
slc38a3b / solute carrier family 38, member 3b / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG0000009106165
slc38a4 / solute carrier family 38, member 4 / Q8R1S9* / Q969I6* / Mus musculus solute carrier family 38, member 4 (Slc38a4), transcript variant 1, mRNA.*ENSDARG0000001814957
Q5SPB1 / slc38a2 / solute carrier family 38, member 2 / Q96QD8* / Q8CFE6* / Sodium-coupled neutral amino acid transporter 2 *ENSDARG0000004588655
slc38a6 / solute carrier family 38, member 6 / G3UVW3* / Q8IZM9* / Probable sodium-coupled neutral amino acid transporter 6 *ENSDARG0000005431244
A8KBL5 / slc38a11 / solute carrier family 38, member 11 / Q08AI6* / Q3USY0* / Putative sodium-coupled neutral amino acid transporter 11 *ENSDARG0000004025723
slc38a10 / solute carrier family 38, member 10 / Q5I012* / Q9HBR0* / Putative sodium-coupled neutral amino acid transporter 10 *ENSDARG0000007708122


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015816 glycine transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015187 glycine transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr