ENSDARG00000045886


Danio rerio

Features
Gene ID: ENSDARG00000045886
  
Biological name :slc38a2
  
Synonyms : Q5SPB1 / slc38a2 / solute carrier family 38, member 2
  
Possible biological names infered from orthology : Q8CFE6 / Q96QD8 / Sodium-coupled neutral amino acid transporter 2
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 1600034
Gene end: 1617897
  
Corresponding Affymetrix probe sets: Dr.7568.1.A1_at (Zebrafish Array)   NM_001045104_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000118404
NCBI entrez gene - 566537     See in Manteia.
RefSeq - NM_001045104
RefSeq Peptide - NP_001038569
swissprot - Q5SPB1
ZFIN ID - ZDB-GENE-030131-9659
Ensembl - ENSDARG00000045886
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC38A2ENSGALG00000008497Gallus gallus
 Q96QD8ENSG00000134294Homo sapiens
 Q8CFE6ENSMUSG00000022462Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc38a4 / solute carrier family 38, member 4 / Q8R1S9* / Q969I6* / Mus musculus solute carrier family 38, member 4 (Slc38a4), transcript variant 1, mRNA.*ENSDARG0000001814962
slc38a3a / solute carrier family 38, member 3a / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG0000002706553
slc38a5b / solute carrier family 38, member 5b / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG0000001458752
slc38a3b / solute carrier family 38, member 3b / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG0000009106151
slc38a5a / solute carrier family 38, member 5a / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG0000000990149
slc38a6 / solute carrier family 38, member 6 / G3UVW3* / Q8IZM9* / Probable sodium-coupled neutral amino acid transporter 6 *ENSDARG0000005431238
A8KBL5 / slc38a11 / solute carrier family 38, member 11 / Q08AI6* / Q3USY0* / Putative sodium-coupled neutral amino acid transporter 11 *ENSDARG0000004025722
slc38a10 / solute carrier family 38, member 10 / Q5I012* / Q9HBR0* / Putative sodium-coupled neutral amino acid transporter 10 *ENSDARG0000007708117


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IBA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0006865 amino acid transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Glutamate Neurotransmitter Release Cycle
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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