ENSDARG00000054312


Danio rerio

Features
Gene ID: ENSDARG00000054312
  
Biological name :slc38a6
  
Synonyms : slc38a6 / solute carrier family 38, member 6
  
Possible biological names infered from orthology : G3UVW3 / Probable sodium-coupled neutral amino acid transporter 6 / Q8IZM9
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 31687973
Gene end: 31707870
  
Corresponding Affymetrix probe sets: Dr.1298.1.A1_at (Zebrafish Array)   NM_001020472_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000070951
NCBI entrez gene - 336741     See in Manteia.
RefSeq - NM_001020472
RefSeq Peptide - NP_001018308
swissprot - B8A5H0
ZFIN ID - ZDB-GENE-050522-51
Ensembl - ENSDARG00000054312
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC38A6ENSGALG00000011893Gallus gallus
 Q8IZM9ENSG00000139974Homo sapiens
 G3UVW3ENSMUSG00000044712Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc38a5b / solute carrier family 38, member 5b / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG0000001458747
slc38a3a / solute carrier family 38, member 3a / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG0000002706546
slc38a4 / solute carrier family 38, member 4 / Q8R1S9* / Q969I6* / Mus musculus solute carrier family 38, member 4 (Slc38a4), transcript variant 1, mRNA.*ENSDARG0000001814945
slc38a3b / solute carrier family 38, member 3b / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG0000009106144
slc38a5a / solute carrier family 38, member 5a / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG0000000990143
Q5SPB1 / slc38a2 / solute carrier family 38, member 2 / Q96QD8* / Q8CFE6* / Sodium-coupled neutral amino acid transporter 2 *ENSDARG0000004588642
A8KBL5 / slc38a11 / solute carrier family 38, member 11 / Q08AI6* / Q3USY0* / Putative sodium-coupled neutral amino acid transporter 11 *ENSDARG0000004025725
slc38a10 / solute carrier family 38, member 10 / Q5I012* / Q9HBR0* / Putative sodium-coupled neutral amino acid transporter 10 *ENSDARG0000007708118


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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