ENSMUSG00000044712


Mus musculus

Features
Gene ID: ENSMUSG00000044712
  
Biological name :Slc38a6
  
Synonyms : G3UVW3 / Probable sodium-coupled neutral amino acid transporter 6 / Slc38a6
  
Possible biological names infered from orthology : Q8IZM9 / solute carrier family 38 member 6
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: C3
Gene start: 73286779
Gene end: 73354049
  
Corresponding Affymetrix probe sets: 10396383 (MoGene1.0st)   1457266_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120810
Ensembl peptide - ENSMUSP00000118374
Ensembl peptide - ENSMUSP00000124386
Ensembl peptide - ENSMUSP00000057153
Ensembl peptide - ENSMUSP00000098871
Ensembl peptide - ENSMUSP00000114870
NCBI entrez gene - 625098     See in Manteia.
MGI - MGI:3648156
RefSeq - XM_017315149
RefSeq - NM_001037717
RefSeq - XM_006516118
RefSeq - XM_006516123
RefSeq - XM_011244154
RefSeq - XM_017315147
RefSeq - XM_017315148
RefSeq Peptide - NP_001032806
swissprot - F2Z3Y3
swissprot - G3UVW3
swissprot - E0CY99
swissprot - D3YUW5
swissprot - Q3USV8
Ensembl - ENSMUSG00000044712
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc38a6ENSDARG00000054312Danio rerio
 SLC38A6ENSGALG00000011893Gallus gallus
 Q8IZM9ENSG00000139974Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8CFE6 / Slc38a2 / Sodium-coupled neutral amino acid transporter 2 / Q96QD8* / solute carrier family 38 member 2*ENSMUSG0000002246245
Q8R1S9 / Slc38a4 / Mus musculus solute carrier family 38, member 4 (Slc38a4), transcript variant 1, mRNA. / Q969I6* / solute carrier family 38 member 4*ENSMUSG0000002246445
Q9DCP2 / Slc38a3 / Sodium-coupled neutral amino acid transporter 3 / Q99624* / solute carrier family 38 member 3*ENSMUSG0000001006445
Q3U1J0 / Slc38a5 / Sodium-coupled neutral amino acid transporter 5 / Q8WUX1* / solute carrier family 38 member 5*ENSMUSG0000003117041
Q8K2P7 / Slc38a1 / Sodium-coupled neutral amino acid transporter 1 / Q9H2H9* / solute carrier family 38 member 1*ENSMUSG0000002316940
Q3USY0 / Slc38a11 / Putative sodium-coupled neutral amino acid transporter 11 / Q08AI6* / solute carrier family 38 member 11*ENSMUSG0000006117123
Q5I012 / Slc38a10 / Putative sodium-coupled neutral amino acid transporter 10 / Q9HBR0* / solute carrier family 38 member 10*ENSMUSG0000006130620


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain
 IPR027460  Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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