ENSMUSG00000022464


Mus musculus

Features
Gene ID: ENSMUSG00000022464
  
Biological name :Slc38a4
  
Synonyms : Mus musculus solute carrier family 38, member 4 (Slc38a4), transcript variant 1, mRNA. / Q8R1S9 / Slc38a4
  
Possible biological names infered from orthology : Q969I6 / solute carrier family 38 member 4
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: F1
Gene start: 96994820
Gene end: 97055956
  
Corresponding Affymetrix probe sets: 10431915 (MoGene1.0st)   1428111_at (Mouse Genome 430 2.0 Array)   1448889_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000155158
Ensembl peptide - ENSMUSP00000127676
Ensembl peptide - ENSMUSP00000154818
Ensembl peptide - ENSMUSP00000023101
Ensembl peptide - ENSMUSP00000155372
NCBI entrez gene - 69354     See in Manteia.
MGI - MGI:1916604
RefSeq - XM_006521351
RefSeq - NM_001358058
RefSeq - NM_001358059
RefSeq - NM_001358060
RefSeq - NM_027052
RefSeq - XM_006521346
RefSeq - XM_006521348
RefSeq - XM_006521349
RefSeq - XM_006521350
RefSeq Peptide - NP_001344987
RefSeq Peptide - NP_001344988
RefSeq Peptide - NP_001344989
RefSeq Peptide - NP_081328
swissprot - Q8R1S9
Ensembl - ENSMUSG00000022464
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc38a4ENSDARG00000018149Danio rerio
 SLC38A4ENSGALG00000009730Gallus gallus
 Q969I6ENSG00000139209Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8CFE6 / Slc38a2 / Sodium-coupled neutral amino acid transporter 2 / Q96QD8* / solute carrier family 38 member 2*ENSMUSG0000002246258
Q9DCP2 / Slc38a3 / Sodium-coupled neutral amino acid transporter 3 / Q99624* / solute carrier family 38 member 3*ENSMUSG0000001006449
Q8K2P7 / Slc38a1 / Sodium-coupled neutral amino acid transporter 1 / Q9H2H9* / solute carrier family 38 member 1*ENSMUSG0000002316945
Q3U1J0 / Slc38a5 / Sodium-coupled neutral amino acid transporter 5 / Q8WUX1* / solute carrier family 38 member 5*ENSMUSG0000003117044
G3UVW3 / Slc38a6 / Probable sodium-coupled neutral amino acid transporter 6 / Q8IZM9* / solute carrier family 38 member 6*ENSMUSG0000004471238
Q3USY0 / Slc38a11 / Putative sodium-coupled neutral amino acid transporter 11 / Q08AI6* / solute carrier family 38 member 11*ENSMUSG0000006117121
Q5I012 / Slc38a10 / Putative sodium-coupled neutral amino acid transporter 10 / Q9HBR0* / solute carrier family 38 member 10*ENSMUSG0000006130617


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IBA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0006865 amino acid transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr