ENSDARG00000018149


Danio rerio

Features
Gene ID: ENSDARG00000018149
  
Biological name :slc38a4
  
Synonyms : slc38a4 / solute carrier family 38, member 4
  
Possible biological names infered from orthology : Mus musculus solute carrier family 38, member 4 (Slc38a4), transcript variant 1, mRNA. / Q8R1S9 / Q969I6
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 1516716
Gene end: 1566572
  
Corresponding Affymetrix probe sets: Dr.7516.1.A1_at (Zebrafish Array)   NM_001005944_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000067445
Ensembl peptide - ENSDARP00000124385
NCBI entrez gene - 449771     See in Manteia.
RefSeq - NM_001005944
RefSeq Peptide - NP_001005944
swissprot - F8W3J7
swissprot - Q5SPB0
ZFIN ID - ZDB-GENE-041010-14
Ensembl - ENSDARG00000018149
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC38A4ENSGALG00000009730Gallus gallus
 Q969I6ENSG00000139209Homo sapiens
 Q8R1S9ENSMUSG00000022464Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5SPB1 / slc38a2 / solute carrier family 38, member 2 / Q96QD8* / Q8CFE6* / Sodium-coupled neutral amino acid transporter 2 *ENSDARG0000004588658
slc38a3a / solute carrier family 38, member 3a / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG0000002706552
slc38a3b / solute carrier family 38, member 3b / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG0000009106151
slc38a5b / solute carrier family 38, member 5b / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG0000001458750
slc38a5a / solute carrier family 38, member 5a / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG0000000990147
slc38a6 / solute carrier family 38, member 6 / G3UVW3* / Q8IZM9* / Probable sodium-coupled neutral amino acid transporter 6 *ENSDARG0000005431238
A8KBL5 / slc38a11 / solute carrier family 38, member 11 / Q08AI6* / Q3USY0* / Putative sodium-coupled neutral amino acid transporter 11 *ENSDARG0000004025719
slc38a10 / solute carrier family 38, member 10 / Q5I012* / Q9HBR0* / Putative sodium-coupled neutral amino acid transporter 10 *ENSDARG0000007708117


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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