ENSDARG00000077081


Danio rerio

Features
Gene ID: ENSDARG00000077081
  
Biological name :slc38a10
  
Synonyms : slc38a10 / solute carrier family 38, member 10
  
Possible biological names infered from orthology : Putative sodium-coupled neutral amino acid transporter 10 / Q5I012 / Q9HBR0
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 34763795
Gene end: 34822821
  
Corresponding Affymetrix probe sets: Dr.4536.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000105002
Ensembl peptide - ENSDARP00000127359
Ensembl peptide - ENSDARP00000127464
Ensembl peptide - ENSDARP00000144321
NCBI entrez gene - 561739     See in Manteia.
RefSeq - XM_017358553
RefSeq - XM_021480386
RefSeq - XM_017358552
swissprot - U3JAU0
swissprot - E7F671
swissprot - U3JB42
ZFIN ID - ZDB-GENE-050309-21
Ensembl - ENSDARG00000077081
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC38A10ENSGALG00000006880Gallus gallus
 Q9HBR0ENSG00000157637Homo sapiens
 Q5I012ENSMUSG00000061306Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc38a5b / solute carrier family 38, member 5b / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG000000145879
slc38a4 / solute carrier family 38, member 4 / Q8R1S9* / Q969I6* / Mus musculus solute carrier family 38, member 4 (Slc38a4), transcript variant 1, mRNA.*ENSDARG000000181498
slc38a3b / solute carrier family 38, member 3b / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG000000910618
slc38a5a / solute carrier family 38, member 5a / Q8WUX1* / Q3U1J0* / SLC38A5* / solute carrier family 38 member 5* / Sodium-coupled neutral amino acid transporter 5 *ENSDARG000000099018
slc38a3a / solute carrier family 38, member 3a / Q9DCP2* / Q99624* / SLC38A3* / solute carrier family 38 member 3* / Sodium-coupled neutral amino acid transporter 3 *ENSDARG000000270658
Q5SPB1 / slc38a2 / solute carrier family 38, member 2 / Q96QD8* / Q8CFE6* / Sodium-coupled neutral amino acid transporter 2 *ENSDARG000000458867
A8KBL5 / slc38a11 / solute carrier family 38, member 11 / Q08AI6* / Q3USY0* / Putative sodium-coupled neutral amino acid transporter 11 *ENSDARG000000402577
slc38a6 / solute carrier family 38, member 6 / G3UVW3* / Q8IZM9* / Probable sodium-coupled neutral amino acid transporter 6 *ENSDARG000000543127


Protein motifs (from Interpro)
Interpro ID Name
 IPR013057  Amino acid transporter, transmembrane domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015171 amino acid transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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