ENSDARG00000016290


Danio rerio

Features
Gene ID: ENSDARG00000016290
  
Biological name :clca1
  
Synonyms : chloride channel accessory 1 / clca1
  
Possible biological names infered from orthology : A8K7I4 / Calcium-activated chloride channel regulator 1 / Calcium-activated chloride channel regulator 2 / Calcium-activated chloride channel regulator 3A-1 / chloride channel accessory 2 / chloride channel accessory 3A2 / chloride channel accessory 3B / chloride channel accessory 4 / chloride channel accessory 4B / CLCA2 / Clca3a1 / Clca3a2 / Clca3b / CLCA4 / Clca4a / Clca4b / Q14CN2 / Q8BG22 / Q9D7Z6 / Q9QX15 / Q9UQC9
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 14109652
Gene end: 14120431
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129701
NCBI entrez gene - 334289     See in Manteia.
swissprot - X1WHI8
ZFIN ID - ZDB-GENE-030131-6221
Ensembl - ENSDARG00000016290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000006322Gallus gallus
 CLCA1ENSG00000016490Homo sapiens
 CLCA2ENSG00000137975Homo sapiens
 CLCA4ENSG00000016602Homo sapiens
 Clca1ENSMUSG00000028255Mus musculus
 Clca2ENSMUSG00000036960Mus musculus
 Clca3a2ENSMUSG00000028262Mus musculus
 Clca3bENSMUSG00000037033Mus musculus
 Clca4aENSMUSG00000068547Mus musculus
 Clca4bENSMUSG00000074195Mus musculus
 Q9QX15ENSMUSG00000056025Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clca1 / clca5.2 / chloride channel accessory 5, tandem duplicate 2 / CLCA4* / CLCA2* / A8K7I4* / Clca3b* / Clca4a* / Clca4b* / Q14CN2* / Q8BG22* / Q9D7Z6* / Q9QX15* / Q9UQC9* / Clca3a1* / C...ENSDARG0000010094162
clca5.1 / chloride channel accessory 5, tandem duplicate 1 / CLCA4* / CLCA2* / CLCA1* / A8K7I4* / Clca3b* / Clca4a* / Clca4b* / Q14CN2* / Q8BG22* / Q9D7Z6* / Q9QX15* / Q9UQC9* / Clca3a1* / ...ENSDARG0000009960637
si:ch211-116o3.3 / CLCA1* / CLCA4* / CLCA2* / A8K7I4* / Clca3b* / Clca4a* / Clca4b* / Q14CN2* / Q8BG22* / Q9D7Z6* / Q9QX15* / Q9UQC9* / Clca3a1* / Clca3a2* / chloride channel accessory 4* /...ENSDARG0000008649815


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR013642  Calcium-activated chloride channel, N-terminal
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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