ENSMUSG00000074195


Mus musculus

Features
Gene ID: ENSMUSG00000074195
  
Biological name :Clca4b
  
Synonyms : chloride channel accessory 4B / Clca4b
  
Possible biological names infered from orthology : chloride channel accessory 4 / CLCA4 / Q14CN2
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: H2
Gene start: 144910921
Gene end: 144932529
  
Corresponding Affymetrix probe sets: 10502613 (MoGene1.0st)   1439796_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000096149
NCBI entrez gene - 99709     See in Manteia.
MGI - MGI:2139790
RefSeq - NM_001033199
RefSeq Peptide - NP_001028371
swissprot - Q3UW98
Ensembl - ENSMUSG00000074195
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clca1ENSDARG00000016290Danio rerio
 clca1ENSDARG00000100941Danio rerio
 clca5.1ENSDARG00000099606Danio rerio
 si:ch211-116o3.3ENSDARG00000086498Danio rerio
 ENSGALG00000006322Gallus gallus
 CLCA4ENSG00000016602Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Clca4a / CLCA4* / Q14CN2* / chloride channel accessory 4*ENSMUSG0000006854794
Clca1 / Q9D7Z6 / Calcium-activated chloride channel regulator 1 / A8K7I4* / chloride channel accessory 1*ENSMUSG0000002825553
Q9QX15 / Clca3a1 / Calcium-activated chloride channel regulator 3A-1 ENSMUSG0000005602547
Clca3a2 / chloride channel accessory 3A2ENSMUSG0000002826247
Clca3b / chloride channel accessory 3BENSMUSG0000003703347
Clca2 / Q8BG22 / Calcium-activated chloride channel regulator 2 / Q9UQC9* / chloride channel accessory 2*ENSMUSG0000003696040


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR004727  Calcium-activated chloride channel protein, chordata
 IPR013642  Calcium-activated chloride channel, N-terminal
 IPR013783  Immunoglobulin-like fold
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR036465  von Willebrand factor A-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005229 intracellular calcium activated chloride channel activity IBA
 molecular_functionGO:0008237 metallopeptidase activity IEA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Bhlha15tm3(cre/ERT2)Skz/Bhlha15tm3(cre/ERT2)Skz
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr