ENSDARG00000016775


Danio rerio

Features
Gene ID: ENSDARG00000016775
  
Biological name :aqr
  
Synonyms : aqr / aquarius intron-binding spliceosomal factor
  
Possible biological names infered from orthology : Intron-binding protein aquarius / O60306 / Q8CFQ3
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 51020114
Gene end: 51121525
  
Corresponding Affymetrix probe sets: Dr.17308.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000007286
Ensembl peptide - ENSDARP00000110866
swissprot - F1Q7N6
swissprot - F1QQV6
ZFIN ID - ZDB-GENE-040426-1189
Ensembl - ENSDARG00000016775
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AQRENSGALG00000009838Gallus gallus
 AQRENSG00000021776Homo sapiens
 AqrENSMUSG00000040383Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
setx / senataxin / A2AKX3* / Q7Z333* / Probable helicase senataxin *ENSDARG0000002299614
znfx1 / zinc finger, NFX1-type containing 1 / Q8R151* / Q9P2E3*ENSDARG0000010028014


Protein motifs (from Interpro)
Interpro ID Name
 IPR026300  CWF11 family
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032174  Intron-binding protein aquarius, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IEA


Pathways (from Reactome)
Pathway description
Formation of TC-NER Pre-Incision Complex
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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