ENSDARG00000022996


Danio rerio

Features
Gene ID: ENSDARG00000022996
  
Biological name :setx
  
Synonyms : senataxin / setx
  
Possible biological names infered from orthology : A2AKX3 / Probable helicase senataxin / Q7Z333
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 3928947
Gene end: 3973165
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000124613
Ensembl peptide - ENSDARP00000124379
Ensembl peptide - ENSDARP00000145955
NCBI entrez gene - 562474     See in Manteia.
swissprot - E7FBJ2
swissprot - F8W2T6
ZFIN ID - ZDB-GENE-070402-1
Ensembl - ENSDARG00000022996
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SETXENSGALG00000003661Gallus gallus
 SETXENSG00000107290Homo sapiens
 SetxENSMUSG00000043535Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
aqr / aquarius intron-binding spliceosomal factor / O60306*ENSDARG000000167759
znfx1 / zinc finger, NFX1-type containing 1 / Q8R151* / Q9P2E3*ENSDARG000001002807


Protein motifs (from Interpro)
Interpro ID Name
 IPR016024  Armadillo-type fold
 IPR024481  Helicase Sen1, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr