ENSGALG00000009838


Gallus gallus

Features
Gene ID: ENSGALG00000009838
  
Biological name :AQR
  
Synonyms : AQR / aquarius intron-binding spliceosomal factor
  
Possible biological names infered from orthology : Intron-binding protein aquarius / O60306 / Q8CFQ3
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 32217852
Gene end: 32264571
  
Corresponding Affymetrix probe sets: Gga.18387.1.S1_s_at (Chicken Array)   GgaAffx.23051.1.S1_at (Chicken Array)   GgaAffx.6168.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053624
Ensembl peptide - ENSGALP00000015978
Ensembl peptide - ENSGALP00000044971
NCBI entrez gene - 423296     See in Manteia.
RefSeq - XM_421216
RefSeq - XM_015287616
RefSeq - XM_015287617
RefSeq - XM_015287614
RefSeq - XM_015287615
swissprot - F1NPB8
swissprot - A0A1D5NX78
Ensembl - ENSGALG00000009838
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aqrENSDARG00000016775Danio rerio
 AQRENSG00000021776Homo sapiens
 AqrENSMUSG00000040383Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZNFX1 / zinc finger NFX1-type containing 1 / Q8R151* / Q9P2E3*ENSGALG0000000485917
SETX / senataxin / A2AKX3* / Q7Z333* / Probable helicase senataxin *ENSGALG0000000366114


Protein motifs (from Interpro)
Interpro ID Name
 IPR026300  CWF11 family
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032174  Intron-binding protein aquarius, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA


Pathways (from Reactome)
Pathway description
Formation of TC-NER Pre-Incision Complex
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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