ENSDARG00000017036


Danio rerio

Features
Gene ID: ENSDARG00000017036
  
Biological name :si:dkeyp-57f11.2
  
Synonyms : si:dkeyp-57f11.2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 39112898
Gene end: 39171968
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128280
Ensembl peptide - ENSDARP00000129225
NCBI entrez gene - 100006087     See in Manteia.
RefSeq - XM_005164166
RefSeq - XM_009299674
RefSeq - XM_021474701
RefSeq - XM_021474702
RefSeq - XM_005164169
swissprot - X1WG70
swissprot - X1WDI1
ZFIN ID - ZDB-GENE-041008-237
Ensembl - ENSDARG00000017036
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
svila / supervillin a / SVIL* / O95425* / Q8K4L3* / supervillin*ENSDARG0000005507535
si:dkeyp-94b4.1ENSDARG0000010205633
vill / villin-like / O15195*ENSDARG0000000190913
vil1 / villin 1 / P09327* / Q62468*ENSDARG0000004046613
avil / advillin / O75366*ENSDARG0000005934212
gsnb / gelsolin b / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000004526211
scinlb / scinderin like bENSDARG0000005834811
scin / scinderin / Q60604* / Q9Y6U3*ENSDARG0000001072811
gsna / gelsolin a / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000001145911
flii / flightless I actin binding protein / Q9JJ28* / Q13045* / isoform 2 * / FLII, actin remodeling protein*ENSDARG0000005970111
scinla / scinderin like aENSDARG0000010241511
svilb / supervillin bENSDARG000000146515
capgb / capping protein (actin filament), gelsolin-like b / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG000000996725
capga / capping protein (actin filament), gelsolin-like a / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG000000355605
CABZ01044731.1ENSDARG000001102912


Protein motifs (from Interpro)
Interpro ID Name
 IPR003128  Villin headpiece
 IPR007122  Villin/Gelsolin
 IPR007123  Gelsolin-like domain
 IPR029006  ADF-H/Gelsolin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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