ENSDARG00000045262


Danio rerio

Features
Gene ID: ENSDARG00000045262
  
Biological name :gsnb
  
Synonyms : gelsolin b / gsnb
  
Possible biological names infered from orthology : gelsolin / GSN / P06396 / P13020
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 63294865
Gene end: 63302944
  
Corresponding Affymetrix probe sets: Dr.17943.1.A1_at (Zebrafish Array)   Dr.4727.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000047109
NCBI entrez gene - 336623     See in Manteia.
RefSeq - NM_001089344
RefSeq Peptide - NP_001082813
swissprot - F1QQQ5
ZFIN ID - ZDB-GENE-030131-8567
Ensembl - ENSDARG00000045262
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GSNENSGALG00000001446Gallus gallus
 GSNENSG00000148180Homo sapiens
 GsnENSMUSG00000026879Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gsna / gelsolin a / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000001145974
scin / scinderin / Q60604* / Q9Y6U3*ENSDARG0000001072860
scinla / scinderin like aENSDARG0000010241557
scinlb / scinderin like bENSDARG0000005834856
avil / advillin / O75366*ENSDARG0000005934247
vil1 / villin 1 / P09327* / Q62468*ENSDARG0000004046646
vill / villin-like / O15195*ENSDARG0000000190945
flii / flightless I actin binding protein / Q9JJ28* / Q13045* / isoform 2 * / FLII, actin remodeling protein*ENSDARG0000005970127
svila / supervillin a / SVIL* / O95425* / Q8K4L3* / supervillin*ENSDARG0000005507526
si:dkeyp-94b4.1ENSDARG0000010205623
si:dkeyp-57f11.2ENSDARG0000001703622
capga / capping protein (actin filament), gelsolin-like a / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG0000003556022
capgb / capping protein (actin filament), gelsolin-like b / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG0000009967222
svilb / supervillin bENSDARG000000146511
CABZ01044731.1ENSDARG000001102910


Protein motifs (from Interpro)
Interpro ID Name
 IPR007122  Villin/Gelsolin
 IPR007123  Gelsolin-like domain
 IPR029006  ADF-H/Gelsolin-like domain superfamily
 IPR030004  Gelsolin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045010 actin nucleation IEA
 biological_processGO:0051014 actin filament severing IEA
 biological_processGO:0051016 barbed-end actin filament capping IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Caspase-mediated cleavage of cytoskeletal proteins
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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