ENSDARG00000058348


Danio rerio

Features
Gene ID: ENSDARG00000058348
  
Biological name :scinlb
  
Synonyms : scinderin like b / scinlb
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 10396579
Gene end: 10450784
  
Corresponding Affymetrix probe sets: Dr.6099.1.S1_at (Zebrafish Array)   NM_213090_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000075639
NCBI entrez gene - 406363     See in Manteia.
RefSeq - NM_213090
RefSeq Peptide - NP_998255
swissprot - A5PMZ3
ZFIN ID - ZDB-GENE-040426-2068
Ensembl - ENSDARG00000058348
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scinla / scinderin like aENSDARG0000010241573
scin / scinderin / Q60604* / Q9Y6U3*ENSDARG0000001072859
gsnb / gelsolin b / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000004526257
gsna / gelsolin a / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000001145956
vill / villin-like / O15195*ENSDARG0000000190950
avil / advillin / O75366*ENSDARG0000005934249
vil1 / villin 1 / P09327* / Q62468*ENSDARG0000004046648
flii / flightless I actin binding protein / Q9JJ28* / Q13045* / isoform 2 * / FLII, actin remodeling protein*ENSDARG0000005970129
svila / supervillin a / SVIL* / O95425* / Q8K4L3* / supervillin*ENSDARG0000005507527
si:dkeyp-94b4.1ENSDARG0000010205625
si:dkeyp-57f11.2ENSDARG0000001703624
capga / capping protein (actin filament), gelsolin-like a / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG0000003556021
capgb / capping protein (actin filament), gelsolin-like b / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG0000009967221
svilb / supervillin bENSDARG000000146511
CABZ01044731.1ENSDARG000001102910


Protein motifs (from Interpro)
Interpro ID Name
 IPR007122  Villin/Gelsolin
 IPR007123  Gelsolin-like domain
 IPR029006  ADF-H/Gelsolin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
brain apoptotic , abnormal
Show

 ZFA:0000029 hindbrain hindbrain opaque , abnormal
Show

 ZFA:0000128 midbrain midbrain opaque , abnormal
Show

 ZFA:0001135 neural tube neural tube apoptotic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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