ENSDARG00000040466


Danio rerio

Features
Gene ID: ENSDARG00000040466
  
Biological name :vil1
  
Synonyms : vil1 / villin 1
  
Possible biological names infered from orthology : P09327 / Q62468
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 44907768
Gene end: 44953664
  
Corresponding Affymetrix probe sets: Dr.6348.1.S1_at (Zebrafish Array)   NM_200238_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000153409
Ensembl peptide - ENSDARP00000153798
Ensembl peptide - ENSDARP00000059227
Ensembl peptide - ENSDARP00000113537
Ensembl peptide - ENSDARP00000150199
NCBI entrez gene - 393207     See in Manteia.
RefSeq - NM_200238
RefSeq Peptide - NP_956532
swissprot - E9QJ38
swissprot - F1QVU3
ZFIN ID - ZDB-GENE-040426-799
Ensembl - ENSDARG00000040466
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VIL1ENSGALG00000037286Gallus gallus
 VIL1ENSG00000127831Homo sapiens
 Vil1ENSMUSG00000026175Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
avil / advillin / O75366*ENSDARG0000005934257
vill / villin-like / O15195*ENSDARG0000000190957
scinlb / scinderin like bENSDARG0000005834842
scinla / scinderin like aENSDARG0000010241541
gsnb / gelsolin b / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000004526241
scin / scinderin / Q60604* / Q9Y6U3*ENSDARG0000001072841
gsna / gelsolin a / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000001145940
flii / flightless I actin binding protein / Q9JJ28* / Q13045* / isoform 2 * / FLII, actin remodeling protein*ENSDARG0000005970126
svila / supervillin a / SVIL* / O95425* / Q8K4L3* / supervillin*ENSDARG0000005507526
si:dkeyp-57f11.2ENSDARG0000001703623
si:dkeyp-94b4.1ENSDARG0000010205622
capga / capping protein (actin filament), gelsolin-like a / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG0000003556016
capgb / capping protein (actin filament), gelsolin-like b / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG0000009967216
CABZ01044731.1ENSDARG000001102914
svilb / supervillin bENSDARG000000146511


Protein motifs (from Interpro)
Interpro ID Name
 IPR003128  Villin headpiece
 IPR007122  Villin/Gelsolin
 IPR007123  Gelsolin-like domain
 IPR029006  ADF-H/Gelsolin-like domain superfamily
 IPR030007  Villin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0045010 actin nucleation IEA
 biological_processGO:0051014 actin filament severing IEA
 biological_processGO:0051693 actin filament capping IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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