ENSDARG00000102415


Danio rerio

Features
Gene ID: ENSDARG00000102415
  
Biological name :scinla
  
Synonyms : scinderin like a / scinla
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 24090950
Gene end: 24103666
  
Corresponding Affymetrix probe sets: Dr.10639.1.S1_at (Zebrafish Array)   NM_178131_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000138611
NCBI entrez gene - 323285     See in Manteia.
RefSeq - NM_178131
RefSeq Peptide - NP_835232
swissprot - A0A0R4IQ11
ZFIN ID - ZDB-GENE-030131-2005
Ensembl - ENSDARG00000102415
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scinlb / scinderin like bENSDARG0000005834873
gsna / gelsolin a / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000001145959
scin / scinderin / Q60604* / Q9Y6U3*ENSDARG0000001072858
gsnb / gelsolin b / GSN* / P06396* / P13020* / gelsolin*ENSDARG0000004526258
vill / villin-like / O15195*ENSDARG0000000190950
avil / advillin / O75366*ENSDARG0000005934250
vil1 / villin 1 / P09327* / Q62468*ENSDARG0000004046647
flii / flightless I actin binding protein / Q9JJ28* / Q13045* / isoform 2 * / FLII, actin remodeling protein*ENSDARG0000005970129
svila / supervillin a / SVIL* / O95425* / Q8K4L3* / supervillin*ENSDARG0000005507525
si:dkeyp-94b4.1ENSDARG0000010205623
si:dkeyp-57f11.2ENSDARG0000001703623
capgb / capping protein (actin filament), gelsolin-like b / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG0000009967222
capga / capping protein (actin filament), gelsolin-like a / CAPG* / P40121* / capping actin protein, gelsolin like*ENSDARG0000003556022
svilb / supervillin bENSDARG000000146511
CABZ01044731.1ENSDARG000001102910


Protein motifs (from Interpro)
Interpro ID Name
 IPR007122  Villin/Gelsolin
 IPR007123  Gelsolin-like domain
 IPR029006  ADF-H/Gelsolin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001654 eye development IMP
 biological_processGO:0007417 central nervous system development IMP
 biological_processGO:0007420 brain development IMP
 biological_processGO:0009953 dorsal/ventral pattern formation IMP
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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