ENSDARG00000021151


Danio rerio

Features
Gene ID: ENSDARG00000021151
  
Biological name :ptpreb
  
Synonyms : protein tyrosine phosphatase, receptor type, E, b / ptpreb
  
Possible biological names infered from orthology : P23469 / P49446 / protein tyrosine phosphatase, receptor type E / PTPRE / Receptor-type tyrosine-protein phosphatase epsilon
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 29319587
Gene end: 29343657
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123201
NCBI entrez gene - 569164     See in Manteia.
RefSeq - XM_005158789
RefSeq - NM_001045177
RefSeq Peptide - NP_001038642
swissprot - Q1MTF9
ZFIN ID - ZDB-GENE-060503-263
Ensembl - ENSDARG00000021151
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTPREENSGALG00000009823Gallus gallus
 PTPREENSG00000132334Homo sapiens
 PtpreENSMUSG00000041836Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptprea / protein tyrosine phosphatase, receptor type, E, a / PTPRE* / P49446* / P23469* / protein tyrosine phosphatase, receptor type E* / Receptor-type tyrosine-protein phosphatase epsilon *ENSDARG0000001589175
ptpra / protein tyrosine phosphatase, receptor type, A / P18052* / P18433*ENSDARG0000000176964
ptprsa / protein tyrosine phosphatase, receptor type, s, a / PTPRS* / B0V2N1* / Q13332* / Receptor-type tyrosine-protein phosphatase S * / protein tyrosine phosphatase, receptor type S*ENSDARG0000005973844
ptprfa / protein tyrosine phosphatase, receptor type, f, a / PTPRF* / A2A8L5* / P10586* / protein tyrosine phosphatase, receptor type F* / Receptor-type tyrosine-protein phosphatase F *ENSDARG0000010347943
ptprfb / A4IFW2 / protein tyrosine phosphatase, receptor type, f, b / PTPRF* / P10586* / A2A8L5* / Receptor-type tyrosine-protein phosphatase F * / protein tyrosine phosphatase, receptor type F*ENSDARG0000000575443
ptprsa / protein tyrosine phosphatase, receptor type, s, a / PTPRS* / Q13332* / protein tyrosine phosphatase, receptor type S*ENSDARG0000011094041
ptprc / protein tyrosine phosphatase, receptor type, CENSDARG0000007143736
ptprt / protein tyrosine phosphatase, receptor type, t / O14522* / Q99M80* / Receptor-type tyrosine-protein phosphatase T *ENSDARG0000007478134
ptprk / protein tyrosine phosphatase, receptor type, K / P35822* / Q15262*ENSDARG0000006341633
ptprt / protein tyrosine phosphatase, receptor type, t / O14522*ENSDARG0000009757232
ptprz1a / protein tyrosine phosphatase, receptor-type, Z polypeptide 1a / B9EKR1* / P23471* / PTPRZ1* / protein tyrosine phosphatase, receptor type Z1* / protein tyrosine phosphatase, recep...ENSDARG0000005181431
ptprga / protein tyrosine phosphatase, receptor type, g a / PTPRG* / P23470* / protein tyrosine phosphatase, receptor type G*ENSDARG0000004500631
ca16b / carbonic anhydrase XVI b / PTPRG* / P23470* / protein tyrosine phosphatase, receptor type G* / receptor-type tyrosine-protein phosphatase gamma isoform 2 *ENSDARG0000006012331
ptprub / protein tyrosine phosphatase, receptor type, U, b / PTPRU* / B1AUH1* / Q92729* / protein tyrosine phosphatase, receptor type U*ENSDARG0000010108131
ptprua / protein tyrosine phosphatase, receptor type, U, a / PTPRU* / B1AUH1* / Q92729* / protein tyrosine phosphatase, receptor type U*ENSDARG0000009263830
ptprz1b / protein tyrosine phosphatase, receptor-type, Z polypeptide 1b / B9EKR1* / P23471* / PTPRZ1* / protein tyrosine phosphatase, receptor type Z1* / protein tyrosine phosphatase, recep...ENSDARG0000002087129
si:ch1073-391i24.1 / PTPRM* / P28827* / P28828* / protein tyrosine phosphatase, receptor type M*ENSDARG0000008917215
CABZ01084131.1 / PTPRM* / P28827* / protein tyrosine phosphatase, receptor type M*ENSDARG0000011476215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR016336  Receptor tyrosine-protein phosphatase, alpha/epsilon-type
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0060027 convergent extension involved in gastrulation IGI
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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