ENSDARG00000045006


Danio rerio

Features
Gene ID: ENSDARG00000045006
  
Biological name :ptprga
  
Synonyms : protein tyrosine phosphatase, receptor type, g a / ptprga
  
Possible biological names infered from orthology : P23470 / protein tyrosine phosphatase, receptor type G / PTPRG / receptor-type tyrosine-protein phosphatase gamma isoform 2
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 4953964
Gene end: 5463254
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000086984
NCBI entrez gene - 561197     See in Manteia.
RefSeq - NM_001329864
RefSeq Peptide - NP_001316793
swissprot - F1Q4V8
swissprot - A0A1B1LZI1
ZFIN ID - ZDB-GENE-101101-4
Ensembl - ENSDARG00000045006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTPRGENSGALG00000007177Gallus gallus
 PTPRGENSG00000144724Homo sapiens
 PtprgENSMUSG00000021745Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ca16b / carbonic anhydrase XVI b / PTPRG* / P23470* / protein tyrosine phosphatase, receptor type G* / receptor-type tyrosine-protein phosphatase gamma isoform 2 *ENSDARG0000006012367
ptprz1a / protein tyrosine phosphatase, receptor-type, Z polypeptide 1a / B9EKR1* / P23471* / PTPRZ1* / protein tyrosine phosphatase, receptor type Z1* / protein tyrosine phosphatase, recep...ENSDARG0000005181443
ptprz1b / protein tyrosine phosphatase, receptor-type, Z polypeptide 1b / B9EKR1* / P23471* / PTPRZ1* / protein tyrosine phosphatase, receptor type Z1* / protein tyrosine phosphatase, recep...ENSDARG0000002087137
ptprfa / protein tyrosine phosphatase, receptor type, f, a / PTPRF* / A2A8L5* / P10586* / protein tyrosine phosphatase, receptor type F* / Receptor-type tyrosine-protein phosphatase F *ENSDARG0000010347925
ptprsa / protein tyrosine phosphatase, receptor type, s, a / PTPRS* / B0V2N1* / Q13332* / Receptor-type tyrosine-protein phosphatase S * / protein tyrosine phosphatase, receptor type S*ENSDARG0000005973824
ptprfb / A4IFW2 / protein tyrosine phosphatase, receptor type, f, b / PTPRF* / P10586* / A2A8L5* / Receptor-type tyrosine-protein phosphatase F * / protein tyrosine phosphatase, receptor type F*ENSDARG0000000575424
ptprt / protein tyrosine phosphatase, receptor type, t / O14522* / Q99M80* / Receptor-type tyrosine-protein phosphatase T *ENSDARG0000007478120
ptprub / protein tyrosine phosphatase, receptor type, U, b / PTPRU* / B1AUH1* / Q92729* / protein tyrosine phosphatase, receptor type U*ENSDARG0000010108119
ptprua / protein tyrosine phosphatase, receptor type, U, a / PTPRU* / B1AUH1* / Q92729* / protein tyrosine phosphatase, receptor type U*ENSDARG0000009263819
ptprsa / protein tyrosine phosphatase, receptor type, s, a / PTPRS* / Q13332* / protein tyrosine phosphatase, receptor type S*ENSDARG0000011094018
ptprk / protein tyrosine phosphatase, receptor type, K / P35822* / Q15262*ENSDARG0000006341617
ptpra / protein tyrosine phosphatase, receptor type, A / P18052* / P18433*ENSDARG0000000176916
ptpreb / protein tyrosine phosphatase, receptor type, E, b / PTPRE* / P49446* / P23469* / protein tyrosine phosphatase, receptor type E* / Receptor-type tyrosine-protein phosphatase epsilon *ENSDARG0000002115115
ptprt / protein tyrosine phosphatase, receptor type, t / O14522*ENSDARG0000009757215
ptprea / protein tyrosine phosphatase, receptor type, E, a / PTPRE* / P49446* / P23469* / protein tyrosine phosphatase, receptor type E* / Receptor-type tyrosine-protein phosphatase epsilon *ENSDARG0000001589115
ptprc / protein tyrosine phosphatase, receptor type, CENSDARG0000007143715
CABZ01084131.1 / PTPRM* / P28827* / protein tyrosine phosphatase, receptor type M*ENSDARG000001147627
si:ch1073-391i24.1 / PTPRM* / P28827* / P28828* / protein tyrosine phosphatase, receptor type M*ENSDARG000000891727


Protein motifs (from Interpro)
Interpro ID Name
 IPR000242  PTP type protein phosphatase
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR001148  Alpha carbonic anhydrase domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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