ENSDARG00000021794


Danio rerio

Features
Gene ID: ENSDARG00000021794
  
Biological name :hmmr
  
Synonyms : hmmr / hyaluronan-mediated motility receptor (RHAMM)
  
Possible biological names infered from orthology : hyaluronan mediated motility receptor / O75330 / Q00547
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 28545198
Gene end: 28562971
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000096680
Ensembl peptide - ENSDARP00000104617
NCBI entrez gene - 322012     See in Manteia.
RefSeq - XM_021480967
RefSeq - NM_199580
RefSeq Peptide - NP_955874
swissprot - F1R2Q6
swissprot - E7EYJ3
ZFIN ID - ZDB-GENE-030131-731
Ensembl - ENSDARG00000021794
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HMMRENSGALG00000042009Gallus gallus
 HMMRENSG00000072571Homo sapiens
 HmmrENSMUSG00000020330Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026203  Intracellular hyaluronic acid binding protein
 IPR031787  Hyaluronan mediated motility receptor, N-terminal
 IPR031794  Hyaluronan-mediated motility receptor, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0061026 cardiac muscle tissue regeneration IMP
 molecular_functionGO:0005540 hyaluronic acid binding IBA


Pathways (from Reactome)
Pathway description
Hyaluronan uptake and degradation
AURKA Activation by TPX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005057 epicardium epicardium epithelial to mesenchymal transition decreased occurrence , abnormal
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 ZFA:0005147 regenerating tissue regenerating tissue angiogenesis decreased occurrence , abnormal
regenerating tissue endothelial cell decreased amount , abnormal
regenerating tissue cardiac muscle cell decreased amount , abnormal
regenerating tissue epithelial to mesenchymal transition decreased occurrence , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000062997 hyal2b / hyaluronoglucosaminidase 2b / HYAL2* / Q12891* / O35632* / Hyaluronidase-2 * / hyaluronoglucosaminidase 2*  / reaction / complex
 ENSDARG00000052859 chp1 / calcineurin-like EF-hand protein 1 / P61022* / Q99653* / Calcineurin B homologous protein 1 *  / reaction / complex
 ENSDARG00000059931 hyal2a / hyaluronoglucosaminidase 2a / HYAL2* / Q12891* / O35632* / Hyaluronidase-2 * / hyaluronoglucosaminidase 2*  / reaction / complex
 ENSDARG00000078654 tpx2 / TPX2, microtubule-associated, homolog (Xenopus laevis) / Q9ULW0* / A2APB8* / Targeting protein for Xklp2 * / TPX2, microtubule nucleation factor*  / reaction / complex






 

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