ENSDARG00000052859


Danio rerio

Features
Gene ID: ENSDARG00000052859
  
Biological name :chp1
  
Synonyms : calcineurin-like EF-hand protein 1 / chp1
  
Possible biological names infered from orthology : Calcineurin B homologous protein 1 / P61022 / Q99653
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 45035756
Gene end: 45063686
  
Corresponding Affymetrix probe sets: Dr.4549.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121881
Ensembl peptide - ENSDARP00000110730
NCBI entrez gene - 325361     See in Manteia.
RefSeq - NM_199715
RefSeq Peptide - NP_956009
swissprot - A2CE70
swissprot - Q7T2F7
ZFIN ID - ZDB-GENE-030131-4086
Ensembl - ENSDARG00000052859
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHP1ENSGALG00000008569Gallus gallus
 CHP1ENSG00000187446Homo sapiens
 Chp1ENSMUSG00000014077Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chp2 / calcineurin-like EF-hand protein 2 / O43745* / Q9D869* / Calcineurin B homologous protein 2 *ENSDARG0000002578856
ppp3r1b / protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b / PPP3R1* / P63098* / Q63810* / protein phosphatase 3 regulatory subunit B, alpha* / protein phosphata...ENSDARG0000006936035
ppp3r1a / protein phosphatase 3, regulatory subunit B, alpha a / Q96LZ3* / PPP3R2* / Q63811* / AC017083.3* / protein phosphatase 3 regulatory subunit B, beta* / protein phosphatase 3, regul...ENSDARG0000009265935
tescb / tescalcin b / TESC* / Tescl* / Q9JKL5* / Q96BS2* / tescalcin*ENSDARG0000003083929
tesca / tescalcin a / TESC* / Tescl* / Q9JKL5* / Q96BS2* / tescalcin*ENSDARG0000002834628


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Hyaluronan uptake and degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000100 cerebellum cerebellum hypoplastic , abnormal
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 ZFA:0000445 optic tectum optic tectum decreased size , abnormal
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 ZFA:0001094 whole organism whole organism contractility , abnormal
whole organism movement quality , abnormal
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 ZFA:0009243 CaP motoneuron CaP motoneuron axon truncated , abnormal
CaP motoneuron axon branchiness , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000045748 stab2 / stabilin 2 / Q8R4U0* / Q8WWQ8* / Stabilin-2 Short form stabilin-2*  / reaction / complex
 ENSDARG00000059931 hyal2a / hyaluronoglucosaminidase 2a / HYAL2* / Q12891* / O35632* / Hyaluronidase-2 * / hyaluronoglucosaminidase 2*  / reaction / complex
 ENSDARG00000021794 hmmr / hyaluronan-mediated motility receptor (RHAMM) / O75330* / Q00547* / hyaluronan mediated motility receptor*  / reaction / complex
 ENSDARG00000087863 cd44a / CD44 molecule (Indian blood group) a / CD44* / P16070* / CD44 molecule (Indian blood group)*  / reaction / complex
 ENSDARG00000062997 hyal2b / hyaluronoglucosaminidase 2b / HYAL2* / Q12891* / O35632* / Hyaluronidase-2 * / hyaluronoglucosaminidase 2*  / reaction / complex
 ENSDARG00000089892 cd44b / CD44 molecule (Indian blood group) b / CD44* / P16070* / CD44 molecule (Indian blood group)*  / complex / reaction






 

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